Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2669 ATGAATTTGGCCATAAGGCATATAACCATGATTAAAAATTGCTTTGGTGCTTTGAATTGGTGTAGAGGGAGGGATGATAGTGATACTGCTGAGAAGCCACAGGAACAAGTCATTGCAACCAAACAATTTACCTATAACTCGTTGCGATCGGCAACCAGAGATTTTCACCCTTCAAGCAAACTTGGTGGAGGAGGTTATGGAGTTGTCCACAAGGGAGTTTTAAGAGATGGTACTCCAGTCGCTATCAAGTCTCTTTCTGTTGAGTCTAAACAAGGAACCCGTGAATTTATGACTGAAATTGATATGATATCGAATATACGGCATCCAAATCTTGTCGGACTAGTTGGCTGCTGTGTCGAGGGTAGTCATCGAATATTGGTGTATGAATTTCTGGAGAACAATAGCCTTGCAAGTTCTTTGCTTGGTTCTAAAAGTAAATATGTTGCTCTGGATTGGCCGAAGAGGGCTGCTATTTGCCGCGGTACAGCTTCTGGTTTGGTGTTCCTCCATGATGAGGCTCAGCCAAACATTGTTCACAGAGATATCAAGGCCAGCAACATCCTTCTGGACGAGAACTTCAGCCCGAAAATTGGAGATTTTGGTCTTGCGAAACTTTTTCCTGATAATGTCACCCATGTTAGCACTCGAGTTGCAGGAACGGTGGGATACCTGGCACCGGAATATGCACTTCTAGGACAGCTTACAAAGAAAGCAGATGTATATAGTTTTGGGGTTCTCATGCTTGAAATAATCAGTGGTAAAAGTAGCAGCAAAGCTGCATTTGGAGACAATCTCCTGGTTCTGGTGGAGTGGGCTTGGAAGCTCAAGGAGGAAAATAGGCTTCTGGACATGGTCGATCCGGAACTAGCCGAAGTCGATGAGATGGAGGTTTTCCGGTTCATTAAGGTTGCTCTATTTTGCACTCAGGCTGCCGCTCAGAATCGGCCTAACATGAAGCAAGTGATGGAAATGCTCTCAAAGGAAGTTCATATTAACGAGAAGGCGTTGACTGAGCCTGGAATATACAGATGGCATAGCTCTGGTAAGATGGGTGGTTCTTTGAATGAGACACCATCTTCTCAACTATTCAAGAACAAAAAAACCGGAATGCCGCATGAAAACTCAACCAACTTTAGCAGTAACGACGTCGTGACAGAGATGCTCCCCAGATAA 1173 0.4425 MNLAIRHITMIKNCFGALNWCRGRDDSDTAEKPQEQVIATKQFTYNSLRSATRDFHPSSKLGGGGYGVVHKGVLRDGTPVAIKSLSVESKQGTREFMTEIDMISNIRHPNLVGLVGCCVEGSHRILVYEFLENNSLASSLLGSKSKYVALDWPKRAAICRGTASGLVFLHDEAQPNIVHRDIKASNILLDENFSPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEIISGKSSSKAAFGDNLLVLVEWAWKLKEENRLLDMVDPELAEVDEMEVFRFIKVALFCTQAAAQNRPNMKQVMEMLSKEVHINEKALTEPGIYRWHSSGKMGGSLNETPSSQLFKNKKTGMPHENSTNFSSNDVVTEMLPR* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2669 390 Pfam Protein tyrosine and serine/threonine kinase 58 325 IPR001245 GO:0004672|GO:0006468
Amo14g2669 390 CDD STKc_IRAK 61 327 - -
Amo14g2669 390 SUPERFAMILY Protein kinase-like (PK-like) 34 325 IPR011009 -
Amo14g2669 390 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 13 382 - -
Amo14g2669 390 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 13 382 - -
Amo14g2669 390 SMART serkin_6 55 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g2669 390 MobiDBLite consensus disorder prediction 367 390 - -
Amo14g2669 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Amo14g2669 390 ProSiteProfiles Protein kinase domain profile. 55 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo14g2669 390 MobiDBLite consensus disorder prediction 367 384 - -
Amo14g2669 390 ProSitePatterns Protein kinases ATP-binding region signature. 61 83 IPR017441 GO:0005524
Amo14g2669 390 Gene3D Phosphorylase Kinase; domain 1 21 130 - -
Amo14g2669 390 Gene3D Transferase(Phosphotransferase) domain 1 131 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2669 Amo-Chr14 114301130 114305139 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2669 43 340 Receptor kinase-like Gene Family AT1G56120 53.691 2.59e-105 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo14g2669 PK_Tyr_Ser-Thr 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2669 - - gmx:100816683 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2669 14 114301130 114305139 Amo14g2669 14 114301130 114305139 ECH