Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2638 ATGGCGCCTTCGCGAGTCGCAGCTACGGTGTCATCTTGCTCTTCTCCCGCTTCTTCTTCTTCGCTGTTGCATCTTCGTCTTCCCAAGCCGCCTATTCCAGCTTCGCTTTCCGGTGTTGTTGTTGTTTTAGCTTCTGCTACGTCACCAAATGGCACCGTTTTGGAAAGGAGGAGGCCTGCTAGGCTTGATATACCTGTTAGCTCCTTGGCCTTTGGCATTCCGCCCATACCCTCTGCTACGGCGCCGCGTGATGTTGTGGAGGAAGAGCGTGATGCCTTCTCTATTTATTGCAAGAGAAGGAGGAGGGATGCTTTGCCTGTCCTGTGGTGGCGCACTGGCATTGCTCCTCCTATTCTTCCCCTGCTCCTTTCTTCTCAGCGCTGCTCATCTTCTTCTCAAACCTTCTATAATTTATTGATATCTTCAAGGCATGCTTTTGTGATCAGTAAGATGCTGGAATCAGTTCAATTTTGTGTTGGCACTTCGTCTCTAGTAGTACCAGGGCCAGGTGCACTGATTTTAGACATCTCATTGGATATAGAAGTCAGGGTGAACTACAGATTGCAATCTGAACTGATGGCGCTAATGATGAGCAGAGATTCAGGTATATCTGCGTTTCCTGAGAAGGACAACATATTCTGCTGGAAAGGAAAAATAACAGGAAGTAAAGACCTGTGTTTGAAGGAACTGAGTACAAGTTGTCACTTTCGTTTCCCAATGATTACTCTTTTTAAGGCTCCAAAGGTCAAATTTGAAAGCACCTGCTTCCATCCAAATGTAGATGTTCATGGTAATATATGCTTGGACATTCTTCAGGTAGTAATTATGTGA 831 0.4585 MAPSRVAATVSSCSSPASSSSLLHLRLPKPPIPASLSGVVVVLASATSPNGTVLERRRPARLDIPVSSLAFGIPPIPSATAPRDVVEEERDAFSIYCKRRRRDALPVLWWRTGIAPPILPLLLSSQRCSSSSQTFYNLLISSRHAFVISKMLESVQFCVGTSSLVVPGPGALILDISLDIEVRVNYRLQSELMALMMSRDSGISAFPEKDNIFCWKGKITGSKDLCLKELSTSCHFRFPMITLFKAPKVKFESTCFHPNVDVHGNICLDILQVVIM* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2638 276 Gene3D Ubiquitin Conjugating Enzyme 180 273 IPR016135 -
Amo14g2638 276 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 186 272 - -
Amo14g2638 276 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 183 276 IPR000608 -
Amo14g2638 276 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 20 186 272 - -
Amo14g2638 276 Pfam Ubiquitin-conjugating enzyme 187 272 IPR000608 -
Amo14g2638 276 SUPERFAMILY UBC-like 181 271 IPR016135 -
Amo14g2638 276 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 256 271 IPR023313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2638 Amo-Chr14 112900846 112903449 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2638 25 105 PP2C-type Phosphatase Gene Family AT1G07160 40.476 2.67e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2638 K06688 - aip:107639491 169.088