Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2602 ATGGTTTCAATATATGTTTGGAAGTGCAGAAGGGGAAGGCCTTCTATGACTTCTAGTTCAACACAAGAAGGTAAAGCCGTAGTAATGGGAATTGTAACCGATGATAGCAGAATGTATGAAGTTCCTGCATTGAAGGTTATTGCACCCAGGTTTATAGAGACTGCACATGCTAGAATAGAGATGGCTGGTGGTGAATGCTTGACATTTGATTAG 213 0.4085 MVSIYVWKCRRGRPSMTSSSTQEGKAVVMGIVTDDSRMYEVPALKVIAPRFIETAHARIEMAGGECLTFD* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2602 70 SUPERFAMILY Ribosomal proteins L15p and L18e 25 69 IPR036227 -
Amo14g2602 70 Pfam Ribosomal protein 60S L18 and 50S L18e 16 70 IPR021131 -
Amo14g2602 70 PANTHER 60S RIBOSOMAL PROTEIN L18 23 70 IPR000039 GO:0003735|GO:0005840|GO:0006412
Amo14g2602 70 Gene3D - 5 70 - -
Amo14g2602 70 PANTHER 60S RIBOSOMAL PROTEIN L18-2-LIKE 23 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2602 Amo-Chr14 110508919 110511887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2602 26 70 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 66.667 7.08e-17 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2602 K02883 - pop:7491291 73.9442