Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2570 ATGGATCATCAGGGTCAGTGTTTGATGATGTGGACTAAGAGGAAGTACTCTAATAATCTTGTTACTACTATGCCAACAACAAACAACACTCTTGATATTGTAGAATCATGGGAAGAACAAGCTTTTGCAAAAGATGCAGCTGGTTACATATGGCCACCAAGATCATATTCTTGCAGCTTCTGTAGAAGAGAGTTCAGATCGGCTCAAGCTCTTGGTGGACACATGAATGTTCATAGAAGAGATAGGGCAAGGTTAAAGCAGCAGCAGCAACCATCAAGCCCCATTAATAATGATCAAGAAATTGATGATTATTATGATTTCGAAGTTGAAGCTCATCATCATCATCCAGGTCAAAATAATAATCATCCTTTCACCTCTAATTTGGATTATCCTTATAACAGTAACCCTAGTAGTTATTATTATGATCCTGCTACTAATTGTTCATCATCATCAGTTAGTAAGTTCTTCAAAGAGGGACAAACCGTGATTCCGCTTCTTAATTCTTCTATTTTCCATGGGTGCCTTATGAGGAGTAGTAGTAAGAGTATTATTGTTTCCCCTCCTCATCACCATAGTTTGCCTCAAGATTTCAGATTTTTGGAAACTGTATGTGGTGGTGAAGAGAAAAGTGATGATGACATGGGTGTGAGATTAAGCTTGTTTGTTCATAGGGCTAAAGAGGAAGATATAAGTTCTTTCAAGAAGAGGAAAACAGATGATTCAACGATTCTGAAATCAAGTTCAGTAGTTGATGTTAATCATCATCATCATGTTGAATCACTCAACAAGTTTCAATTCAGCCCTAACTTCATTGAAGAGCTGGATCTGGAGCTGAGACTTGGTTATAGCAGCTCCCAGGTATATAGTAGCAAATAA 876 0.3767 MDHQGQCLMMWTKRKYSNNLVTTMPTTNNTLDIVESWEEQAFAKDAAGYIWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQQQQPSSPINNDQEIDDYYDFEVEAHHHHPGQNNNHPFTSNLDYPYNSNPSSYYYDPATNCSSSSVSKFFKEGQTVIPLLNSSIFHGCLMRSSSKSIIVSPPHHHSLPQDFRFLETVCGGEEKSDDDMGVRLSLFVHRAKEEDISSFKKRKTDDSTILKSSSVVDVNHHHHVESLNKFQFSPNFIEELDLELRLGYSSSQVYSSK* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2570 291 PANTHER CHAIN A, NMR STRUCTURE OF THE SINGLE QALGGH ZINC FINGER DOMAIN FROM ARABIDOPSIS THALIANA SUPERMAN PROTEIN 10 283 - -
Amo14g2570 291 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 83 IPR013087 -
Amo14g2570 291 SUPERFAMILY beta-beta-alpha zinc fingers 53 82 IPR036236 -
Amo14g2570 291 SMART c2h2final6 56 78 IPR013087 -
Amo14g2570 291 Gene3D Classic Zinc Finger 53 115 - -
Amo14g2570 291 PANTHER OS07G0101800 PROTEIN 10 283 - -
Amo14g2570 291 Pfam C2H2-type zinc finger 56 80 - -
Amo14g2570 291 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Amo14g2570 291 MobiDBLite consensus disorder prediction 80 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2570 Amo-Chr14 108049121 108050639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2570 1 99 C2H2 Transcription Factor Family AT5G06070 53.271 1.40e-25 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2570 - - aip:107637911 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2570 14 108049121 108050639 Amo04g1462 04 69189147 69190689 hybridization