Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2565 ATGGTGGTTCACCAACCCAGCTATGCATTGTTGAAGATGTTTGATGCATTCCTAGAGTCTTTGAATTCGGAAGGCAAGCCTATGTTGTATTTCAAGCTCGACATGCTTGCAACTTTTAGACCTTTCGCAATCTATTTGGGAAGAGGAGGAATGTTCATAAACTCATGTTTTGCTCACTGCCAAAGTGAATCACAAGATACGTGGTTTGAAGATGATTCCCCAAGAATAAACAAGACAATTGTAGAAGTAGTTGATGATTGGTATTTTAGCAGAAAAAGAAGCAAGGAAATAGACTATCCATACCCATGTGACACAACTTGTCACAATCTTATACCATATCCTCGTGTTGCTTTGGATATCGCGAAGACTTGA 372 0.3925 MVVHQPSYALLKMFDAFLESLNSEGKPMLYFKLDMLATFRPFAIYLGRGGMFINSCFAHCQSESQDTWFEDDSPRINKTIVEVVDDWYFSRKRSKEIDYPYPCDTTCHNLIPYPRVALDIAKT* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2565 123 Pfam Pectinacetylesterase 27 92 IPR004963 GO:0016787
Amo14g2565 123 PANTHER PECTIN ACETYLESTERASE 9 31 112 - -
Amo14g2565 123 PANTHER NOTUM-RELATED 31 112 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2565 Amo-Chr14 107701361 107703910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2565 31 112 Carbohydrate Esterase AT5G23870 60.714 1.41e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2565 K19882 - aip:110265116 180.259