Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2563 ATGCACAGCAGCCGCCGTGTCTGCGTAGTCCCTGTTTTCGCTATCTGGCCCCGCCCAGGACAAAGTAGCACAATTACAGGACAAAGTAGCACAATTATAGGAACATATGCAGGACAATTCATAACTGAAGGGATTTTGAAGCTAAATATAAAGAAATGGTTAAGGTCATTGATTACTAGAAGTTGTGCTATTGTTCCAACAATGATAGCTGCTATAGTTTTTAATACATCAGAGAGTTCATTGGATACTAAGAATAAATGGCTCAATGTGGTTCAGTTAATTCAAATTCCTTTTGTATTCATTCCACTTCTTACATTGTGTCTAAAGAAGAGGTCATCGAATTGA 345 0.3797 MHSSRRVCVVPVFAIWPRPGQSSTITGQSSTIIGTYAGQFITEGILKLNIKKWLRSLITRSCAIVPTMIAAIVFNTSESSLDTKNKWLNVVQLIQIPFVFIPLLTLCLKKRSSN* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2563 114 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 10 110 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo14g2563 114 Pfam Natural resistance-associated macrophage protein 26 110 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo14g2563 114 PRINTS Natural resistance-associated macrophage protein signature 27 46 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo14g2563 114 PRINTS Natural resistance-associated macrophage protein signature 89 108 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo14g2563 114 PRINTS Natural resistance-associated macrophage protein signature 55 72 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo14g2563 114 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 10 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2563 Amo-Chr14 107621787 107623067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2563 9 111 Inorganic Solute Cotransporters AT1G47240 62.136 1.62e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2563 K21398 - gmx:100801411 145.206