Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2525 ATGATGGGTAGAATCTTCTTCTCTGCGTCAAAGATACTTCTCGGTGCGACAGTCAATGCGCCGGTGCTGCCCCCTTCTTCTTTGCCACCACCAATCACGCGAAGGTTAGCCCAGCCACCACTAGAAGCCCCTGTGAAGCTCAGTCAGCCACCACCTCTGCTCGACCACCCCTTCCCCTGTTCTCAAACTCAGTTGGATCCAGAGCTAGAGTTTGATCATGAAGTATACCTTCTAGGATTTCTTCCAAATGCTGGTGTAGTAGTTGTGCAAGTTATGTTTTTTCTATTGCATGTTTTAAGAGATGGCCATTGGAGTGAACAAGATGCTGCAATTTTAGTACCAGGAGACATAATCAACATTAAATTAGGAGATATCATTCCGGCTGATGCTTGTCTTCTCGAGGGCAATCCTCTAAGTGTTGATCAGTCTGCTTTAATAAGAGAATCTCTTCTAGTGACCAAGAATCCAACTGATGAAATATTTTCTGGATCAACAGTCAAGAAGGGTGAGATAGAAGCAGTTGTGATTGCCACTGGTGTACATGCCTTCTTTGGTAAAGCGGCTCACTTGGTGGACAGCGCTAACCAAGTTGGACACTTCCAGAAAGAAATGGCTGGGATGGATCTCCTCTACAGTGACAAAACTGTAACCTTAACCTTGAATAAGCTCAGTGTTGATAGAATCTTGATTGAGGTTGCTATAGGTGCTGCAATTGTTGGGATGCTTGCTGATCCAAAGGAGGGGGTCCATTTTCTTCCATTCAATCCTGTAGACAAGAGGATTGCTCTAACTTACATTGATTCTGATGGAAATTGGCCCCGTGTGAGAAAAGGGGCTCCGGAGAAGATCATAACCCTTTGCAACTGCAAAGAGGATGTCAGGAAGAAGGTTCATGCAGTGATTAATAAGTTTGCTGAGCATGGACTTCGGTATTTAGGTGTTGCAAGACGCATATTGTAA 960 0.4458 MMGRIFFSASKILLGATVNAPVLPPSSLPPPITRRLAQPPLEAPVKLSQPPPLLDHPFPCSQTQLDPELEFDHEVYLLGFLPNAGVVVVQVMFFLLHVLRDGHWSEQDAAILVPGDIINIKLGDIIPADACLLEGNPLSVDQSALIRESLLVTKNPTDEIFSGSTVKKGEIEAVVIATGVHAFFGKAAHLVDSANQVGHFQKEMAGMDLLYSDKTVTLTLNKLSVDRILIEVAIGAAIVGMLADPKEGVHFLPFNPVDKRIALTYIDSDGNWPRVRKGAPEKIITLCNCKEDVRKKVHAVINKFAEHGLRYLGVARRIL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2525 319 Gene3D - 179 193 - -
Amo14g2525 319 Gene3D - 212 319 IPR023299 GO:0000166
Amo14g2525 319 Pfam E1-E2 ATPase 97 204 - -
Amo14g2525 319 PANTHER CALCIUM-TRANSPORTING ATPASE 233 317 - -
Amo14g2525 319 PANTHER PLASMA MEMBRANE ATPASE 233 317 - -
Amo14g2525 319 PANTHER PLASMA MEMBRANE ATPASE 96 202 - -
Amo14g2525 319 PANTHER PLASMA MEMBRANE ATPASE 203 232 - -
Amo14g2525 319 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 233 318 IPR023299 GO:0000166
Amo14g2525 319 PANTHER CALCIUM-TRANSPORTING ATPASE 96 202 - -
Amo14g2525 319 PANTHER CALCIUM-TRANSPORTING ATPASE 203 232 - -
Amo14g2525 319 SUPERFAMILY Calcium ATPase, transduction domain A 96 191 IPR008250 -
Amo14g2525 319 Gene3D - 97 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2525 Amo-Chr14 104458996 104461592 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2525 202 319 Primary Pumps ATPases AT4G30190 55.405 8.23e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2525 K01535 - gmx:100791692 182.185