Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2482 ATGGCTCAGGATGATGTGAAGCTCTTGGGGGTTGTGGGAAGCCCGTTTGTTTGCAGGGTTCAGATTGCTCTAAAATTGAAGGGAGTTGAATACAAATTTGTAACACAAGATTTGCAGAACAAGAGTGAAGAACTCCTAAAATACAACCCAATTCACAAGAAGGTGCCAGTGCTTGTTCACAATGAGAGGCCCATAAATGAGTCCCTTGTGATTGTTGAGTACATCGATGAAGCTTGGAAGGGCAAATCCATTTTGCCCACTGATCCTTACCAGAGAGCCCTGGCACGTTTCTGGGCCAAGTTCATAGATGACAAGGTGTTCGGTGCTGCATGGAAATCTGTTTTCACCGTTAACGAGGAAGAGCGTGAGAAGAACGTTAAAGAAACACACGAGGCTCTTCAGTTTCTTGAAGATGAGCTTAAAGGCAAGTTCTTTGGAGGAGAGGAATTTGGCCTTGTGGACATTGCCGCTGTATACATTGCGTTTTGGGTGCCTCTGATTCAAGAAATTGCAGGTCTTCAACTGTTCACTAATGAGAAGTTTCCCAAACTCTACAAATGGAGTCAAGAATTTCTCAGTCAACCAACTATCAAAGAGTGTTTGCCTCCTAGAGACCCAATTTTGGCATTCTTCAAAGGTCGCTATGAAAGCCTTCTTGCCTCAGCAAAATAG 672 0.439 MAQDDVKLLGVVGSPFVCRVQIALKLKGVEYKFVTQDLQNKSEELLKYNPIHKKVPVLVHNERPINESLVIVEYIDEAWKGKSILPTDPYQRALARFWAKFIDDKVFGAAWKSVFTVNEEEREKNVKETHEALQFLEDELKGKFFGGEEFGLVDIAAVYIAFWVPLIQEIAGLQLFTNEKFPKLYKWSQEFLSQPTIKECLPPRDPILAFFKGRYESLLASAK* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2482 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 3 218 IPR045073 -
Amo14g2482 223 CDD GST_C_Tau 89 214 IPR045074 GO:0004364|GO:0006749
Amo14g2482 223 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Amo14g2482 223 Coils Coil 119 139 - -
Amo14g2482 223 Gene3D Glutaredoxin 1 87 - -
Amo14g2482 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 210 IPR010987 -
Amo14g2482 223 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Amo14g2482 223 Gene3D - 88 222 - -
Amo14g2482 223 CDD GST_N_Tau 6 79 - -
Amo14g2482 223 Pfam Glutathione S-transferase, C-terminal domain 108 195 IPR004046 -
Amo14g2482 223 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Amo14g2482 223 SFLD Glutathione Transferase (cytosolic) 2 221 IPR040079 -
Amo14g2482 223 SFLD Main.3: Omega- and Tau-like 2 221 IPR045073 -
Amo14g2482 223 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 3 218 - -
Amo14g2482 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2482 Amo-Chr14 102490835 102492039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2482 3 221 Glutathione S-transferase Gene Family AT3G09270 52.703 8.58e-77 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2482 K00799 - gmx:100500680 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2482 14 102490835 102492039 Amo14g2482 14 102490835 102492039 ECH
Amo14g2482 14 102490835 102492039 Amo04g1366 04 65543952 65545241 hybridization