Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2475 ATGACAGCGTGCCAGCTGGCATCCATAGGCCCCGTCCAGCAGCCGGCACAGCAGCCTGCTGCCGCGGCCACCTCGTCAGGGCCGGCAGTCTCCGAATACACGCAGAGAAAGATCTATGTGAGCAACGTTGGGTCCGAATTGGACCCGCAGAAGCTGATGGCGTTCTTCTCGAGGTTCGGTGAGATCGAGGAAGGGCCATTGGGGCTCGACAAGGTCACTGGGAAGCCAAAGGGGTTCTGTTTGTTCGTTTACAAGAGCGTTGATAGTGCGAAGAGGGCGTTGGAGGAGCCTCACAAGGAATTTGAGGGACACGTGTTGCATTGCCAGAAGGCCATTGATGGACCCAAGCAAGGGAGGATGCAGCTGCAGCACAACGTTCCAAGGACGCAGTTTCAGAGGAACGACAACGCAGGGTTTGGTGCTGGTGTTGGTGGTGGCGTTGGTAACAATGTGCAGGGGCATTTGATGGCGCCAGCGGCTGCCGCAGCCAACCCTTTAGGGGTGAACCAAGCAGCTGTGCAGCCGCTGAATCCGGCACTTGGGCAGGCATTGACGGCCCTGCTTACTCAGCAGGGTGCTTCGTTGGGGCTCACCAATTTGTTGGGAGGTTTGGGATCAACTGCAGGGGCTGTTAATTCAGGCGTTCCAGCGGCAGCAGCACACACGATGCAGGGTGGTTACAGTGCTCAGCAGAATATAAGCCCTGGTGTTATGAGCGCGTACGGGAGTCAGGTAGGGCTGCAGGCAGCTTACCCGAACCAGCAGGTCGGGCAGAGTGGCGGCTCTGGAAGAGCGCAACCTGGCGTGGGGCAGTATGGTGGTGTTGCTCCTTACATGGGCCACTAG 846 0.5851 MTACQLASIGPVQQPAQQPAAAATSSGPAVSEYTQRKIYVSNVGSELDPQKLMAFFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSVDSAKRALEEPHKEFEGHVLHCQKAIDGPKQGRMQLQHNVPRTQFQRNDNAGFGAGVGGGVGNNVQGHLMAPAAAAANPLGVNQAAVQPLNPALGQALTALLTQQGASLGLTNLLGGLGSTAGAVNSGVPAAAAHTMQGGYSAQQNISPGVMSAYGSQVGLQAAYPNQQVGQSGGSGRAQPGVGQYGGVAPYMGH* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2475 281 SMART rrm1_1 37 109 IPR000504 GO:0003723
Amo14g2475 281 Gene3D - 7 126 IPR012677 -
Amo14g2475 281 PANTHER GEO13361P1-RELATED 1 281 - -
Amo14g2475 281 CDD RRM_RBM24_RBM38_like 36 111 - -
Amo14g2475 281 SUPERFAMILY RNA-binding domain, RBD 18 126 IPR035979 GO:0003676
Amo14g2475 281 PANTHER - 1 281 - -
Amo14g2475 281 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 107 IPR000504 GO:0003723
Amo14g2475 281 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 119 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2475 Amo-Chr14 101838462 101841557 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2475 29 121 C2H2 Transcription Factor Family AT2G19380 32.979 2.67e-09 55.8