Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2426 ATGAGCCAAGCTCCATTCCGCGAATCTTGGCTAGCCGGCCAATATAACTGCTATGCAGGTTTTGCCTCGTGCGATCTTTATCCACACGTGCATCAGCATGGACCTTACATTGAATCTGAGCTCATTTCCTTTCTTGGGTCAGCTGGATCACTCTTTGACTTGACACTTCCTCTCTTTAGGGGCAACGACACGCGCACCAACTTCGTGATTCATCTCCGCGAAGCTCTGAACAACGAACAGCAAGTCAAAGTGTTCATAGATGAGGATCTCCCAAAGGGGCAAAGCATAGGGCCTTCACTCTCAAAGGCTATTGAAATTTATTCAATTTCTTTTAACACAACTACCACCACAAGCAAAGAAAGGTTTGGGCTCAAGAGAAAAATAGGGACAAGTCTTGTGTATTTGATCAACAAAGAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGATGGGGCTGGTGATGATTTGTTTAAAGAGCTATGGAGGCTGTGCAGGGCCATTAATGGATGTTCCTTGTGTTCAAGACAGAGTTTTCTATTTCCCTCAGAGTCACATTGAATTGTTGCTAGAACCTACAGAACAAGATTTGAGGCAGATGAAGAACCAGAAATCTCCCAAATACGATCTTCCGTCGAACAAGATATTTAAAGAACAAGATTTTTTTCTCTTCTATCAGAAGGTTAATAACTTTTATTAG 756 0.4167 MSQAPFRESWLAGQYNCYAGFASCDLYPHVHQHGPYIESELISFLGSAGSLFDLTLPLFRGNDTRTNFVIHLREALNNEQQVKVFIDEDLPKGQSIGPSLSKAIEIYSISFNTTTTTSKERFGLKRKIGTSLVYLINKEIDEELLQEVVNMGFDRNQLVESLCNRIQNEMGLVMICLKSYGGCAGPLMDVPCVQDRVFYFPQSHIELLLEPTEQDLRQMKNQKSPKYDLPSNKIFKEQDFFLFYQKVNNFY* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2426 251 SUPERFAMILY Toll/Interleukin receptor TIR domain 59 105 IPR035897 -
Amo14g2426 251 CDD UBA_SnRK1_plant 140 169 - -
Amo14g2426 251 Gene3D - 57 117 IPR035897 -
Amo14g2426 251 Pfam TIR domain 59 105 IPR000157 GO:0007165
Amo14g2426 251 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 139 162 IPR015940 -
Amo14g2426 251 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2426 Amo-Chr14 98112356 98115471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2426 180 231 B3 DNA Binding Superfamily AT5G62000 51.923 2.46e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2426 - K07198 ahf:114925841 227.639