Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2408 ATGATAATGGATCCACATCTTCATGGATTTGGTGGTTCCACAAAGGAATTCCGGTTGGAGAATCAGTCTTTGCCAATTCTGCAGAATCAGAGGTTTGAAAATGGTTTATTTGATCAAAGTAGGGAGTTTGGTTACCTTCAGTCCAATCTTCTGCCACCAGCTAATAATACACATTCATCCTCAATTTTGACAAATGATGAGCCTTCTCCGGAGGATTGCGATTTTTCTGATGCAATTTTAGGTTACATCAATCAAATCCTAATGGAAGAAGACATGGAAGACAAGACATGTATGCTTCAAGATTCTTTGGATCTTCAAGTTGCCGAGAAATCGTTATATGAGGTGATAGGTGAAAAGTATCCATCTCAGCCATTAGGGATTAATCCAAATGATGGGGAAGGAGTTAATGACTTGTTTGAAAACTATGGTAGTGATCTTGTTAATGACGGCGATCTTAGTAGCATTGTTATGAGTAGTTCGTTTCTTCGGAACTCAGAGGAAGTACATCGCCAAAACTCTCAAGGGAATAGCATTTCACAGTCATCTCATAGTTCTTCGAATAGTGTAATAAGCAGCTTGGAAGGTCCTGTTGAATCTCCAAATAGCATTCTTCAGGTGCCAGATATGAGCAGTGAGAGTCAATCTATTTTGCAATTTCAGAAGGGTGTCGAGGAGGCTAGTAAATTTCTTCCAAGTGGAAACGGTCTCTTTTCCAATTTTAGTCCAGCTAAGTTGTCGTCACCATTAGAGCCTAAATTGGGGACCAATGCATTTTCTGTTAAGGTAGAGAAGGATGATGGCGAGTCTTTTCTAGCAGGATCCAAGGGAAGAAAGCATTCTGACAGGGAAGAGGGAGACAACGAAGAAAATAGAAGCAGCAAGCAAGCTGCAGTTTATTCGGAACCTACATTGCGGTCAGATATGATTGATATATTCCTGCTTCACAGCGCAGGGGATGGTAAGCAACATTATATGGCACGTCGCGATGCTTTACAGAATAAGAACACGGACAAGATGTTGCCGAGAAATGGTAAGTCAAAAGCATCGAAAACTGGGAAGGGGCGTGGTAAGAAACAAAATGGGAGAAAAGAAGTGGTTGATTTGAGAACCCTTCTGGTTCTTTGTGCACAAGCTGTTGCAGCCGATGACTCCAAAAGTGCCCATGAGTTTCTTAAGCAGATCAAGCAGCACTCGAGTCCTTTTGGAGATGGAAGTCAGAGGTTAGCTCATATGTTTTCAGATGGCCTCGAGGCACGCTTGGCAGGCACTGGAAGCCAAATCTATAAAGGCTTAATTTGTAAAAGAACATCAGCAGCTGATGTTCTTAAAGCATACCATCTATACCTTGCTGCATGCCCGTTTAGAAAGATTTCAAATTTTATGTCAAACATTACAATTAGGACATCTTCTGCAGACTCAATGAGAGTTCATGTTATAGATTTTGGTATCCTTTATGGTTTCCAGTGGCCGACTTTTATTCAGAGGCTTTCGTGGAGATCTGGGGGACCACCGAAACTTCGGATCACAGGAATTGACTTCCCACAACCTGGTTTCAGGCCTGCGGAGAGAATTGTAGAAACGGGACGTCGCTTGGCAGCTTATGCTGAAACTTTCAATGTCCCATTTGAGTACAACGCCATAGCAAAAAAGTGGGAAACAATTCAACTGGAAGAACTGAAGATCGATAGAGATGAATATGTTGTTGTTACTTGTTTTTATCGAGGCAAAAACTTATTGGATGAATCTGTGGTGGTGGAAAGTCCAAGGAATAAGTTCCTCAATTTGATAAGGAAGATCAACCCGGATATCTTCATTCATGGCATTATTAATGGGGCCTTTAATGCCCCTTTTTTTGTTACTCGATTCAGGGAAGCACTGTTTCACTACTCTTCACTGTTTGACATGCTTGAAACTATTGTGCCTCGTGAAGACTGGGAGAGGATGCTGATTGAGAAGGAGATATTCGGGCGAGAAGCATTGAATGTTATAGCCTGTGAAGGCTGCGAGAGAGTCGAGCGGCCAGAGACATATAAGCAGTGGCAAGTCCGAATATTAAGGGCCGGGTTTACGCAACAACCTTTTGATCCTAAGTTAATAGGGATGGCAATGGATAAAGTAAGGTCTGGCTTTCACAAGGATTTCCTAATTGATGAAGATGGTCAGTGGCTGGTGCAAGGTTGGAAGGGGCGAATCATTTACGCACTCTCTTGTTGGAAACCTGCATGA 2226 0.4227 MIMDPHLHGFGGSTKEFRLENQSLPILQNQRFENGLFDQSREFGYLQSNLLPPANNTHSSSILTNDEPSPEDCDFSDAILGYINQILMEEDMEDKTCMLQDSLDLQVAEKSLYEVIGEKYPSQPLGINPNDGEGVNDLFENYGSDLVNDGDLSSIVMSSSFLRNSEEVHRQNSQGNSISQSSHSSSNSVISSLEGPVESPNSILQVPDMSSESQSILQFQKGVEEASKFLPSGNGLFSNFSPAKLSSPLEPKLGTNAFSVKVEKDDGESFLAGSKGRKHSDREEGDNEENRSSKQAAVYSEPTLRSDMIDIFLLHSAGDGKQHYMARRDALQNKNTDKMLPRNGKSKASKTGKGRGKKQNGRKEVVDLRTLLVLCAQAVAADDSKSAHEFLKQIKQHSSPFGDGSQRLAHMFSDGLEARLAGTGSQIYKGLICKRTSAADVLKAYHLYLAACPFRKISNFMSNITIRTSSADSMRVHVIDFGILYGFQWPTFIQRLSWRSGGPPKLRITGIDFPQPGFRPAERIVETGRRLAAYAETFNVPFEYNAIAKKWETIQLEELKIDRDEYVVVTCFYRGKNLLDESVVVESPRNKFLNLIRKINPDIFIHGIINGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGCERVERPETYKQWQVRILRAGFTQQPFDPKLIGMAMDKVRSGFHKDFLIDEDGQWLVQGWKGRIIYALSCWKPA* 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2408 741 PANTHER SCARECROW-LIKE PROTEIN 9 46 740 - -
Amo14g2408 741 MobiDBLite consensus disorder prediction 269 300 - -
Amo14g2408 741 MobiDBLite consensus disorder prediction 166 209 - -
Amo14g2408 741 MobiDBLite consensus disorder prediction 332 361 - -
Amo14g2408 741 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 46 740 IPR005202 -
Amo14g2408 741 MobiDBLite consensus disorder prediction 269 291 - -
Amo14g2408 741 Pfam GRAS domain family 368 739 IPR005202 -
Amo14g2408 741 ProSiteProfiles GRAS family profile. 359 739 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2408 Amo-Chr14 97223042 97226500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2408 45 740 GRAS Transcription Factor Family AT2G37650 52.045 0.0 690
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo14g2408 GRAS 5.5e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2408 - - ccaj:109816616 1119.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2408 14 97223042 97226500 Amo14g2408 14 97223042 97226500 ECH
Amo14g2408 14 97223042 97226500 Amo18g0164 18 2512743 2514683 ECH