Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2366 ATGGGTAACCGAATGGGTAAGCTCTGCGTCTGCTCCTCCGACACTGCCGGAGAAATCTCCGGCAGATTCGACAACGGGATAACCTTCCTCTCCGATTCACATGACAAAGCTCTTGGAGACTCCATCTGCTATGTGAGACCAGACAATTCTCAGTTCTCCCGTGGCGGCGGCGGCAATGTGTTTTCGGACGGCAGCGCCACCTTCGTTACTTTCCGGTCTGTGTCCGGGGCCACCGTGAGTGCAAACACGTCGTCAACGCCTTCTACCTCCCTTGATGATTCTCTTCAGCAAGAGACAGCTTTGGATTCCTCTGCTTCATTTGAGAGTTCAGGTTCCTTCGCTTCCACAATAATGGTGCCTCTGCAACCGCAACCACACGCTCCTGCTGATGAATTCTTTATTCATACCTTTCCAAAGAGCCCGTTGAATAATGGTGTCTCGAACGGTCAAATAGGTGATGAGAAAGCTTATGGTTATGAACATGCCAATAACAAAACATGTGGGCCAAGTTTGAAGAAGTTGCTGAGTGGATCGTTTCTCCCCAAGGAGAAGAGACCGATTTTCAAGAACAACGGGAATGCTAACGCCAGAGTGGGTTGTAGCACTAATTTGAGTGACGAACCAAAGTTTCATAACGTTGTTGTTGTTGATGATGATGACGACGATGATAAGTGTAATTTGTCAAAGGGGTGTCAGAACTTACATTGGGCTCATGGTAGAGCCGGCGAGGATCGTTTACATATCGTGATTTGCGAGGATCATGGGTGGATTTATGTTGGGATTTACGATGGATTCAATGGTCCTGATGCCACTGACTATCTTCTGAACAATTTGTTTTATGCTGTTTATGAAGAACTCAAGAAGATAGTGGGTTGTCAAGATTCCAAATCGTTGGTGGATGGTGGTTCTTATTTTTCCTCAAGTTTCAATAAAGAAAACAATCCAACAGGAAATGGAAACTTGAAAGTAGAGAGAAGGAATAGCAGAAATTGCAAGAAAGAGGTGAAACTGAATGCGAAATTGAGTGAGTGGGATGTTTTGCAAGGTCTTTCGAAGGCGCTGAGGATAACGGAGGCGGCGTTTCTTAAGAGTTCAGATGAGATGATAGCTCAAAATCCGGTGTTGGCTATGATGGGTTCTTGTGTGTTGGTTATGTTGATGAAGGGGGAAGATGTGTACTTGATGAATGTTGGAGATAGCCGCGCTGAGGTTCGTAGAATATGGAGGGAGCATCCAGATGACCCTTCTGCTGTAACTAAAGGAAGGGTTAAAGGTTACTTGAATGTCACAAGGGCTTTTGGGGCCGGCTTCCTTAAGCAGCCTAAACAAAACAATGCAGTGTTGGAGACATTCAAAGTGAACTACATTGGAGACTCCCCATACATTACATGCTGCCCTTCACTCCACCACTATAGGCTCGGTCCAAATGACAAATTCCTCTTACTCTCTTCTGATGGAATTTTCCAATACTTCACCAATGAAGAAGCAATTTTTAAAGTGGACTACTTCATCACTATGTTCCCAGACATAGATCCTGCACAACTTCTCATTGAAGAAACACTGCACAGAGCAGCCAAAAAAGCTGGTATGAATTTCCATGAGTTGCTTGATATCCCACAAGGAGAAAGACGACTTTACCATGATGACATTTCTGTTGTCATAATCTCTTTGGAGGGAAAAATATGGCGTTCGACAGTATAA 1701 0.4462 MGNRMGKLCVCSSDTAGEISGRFDNGITFLSDSHDKALGDSICYVRPDNSQFSRGGGGNVFSDGSATFVTFRSVSGATVSANTSSTPSTSLDDSLQQETALDSSASFESSGSFASTIMVPLQPQPHAPADEFFIHTFPKSPLNNGVSNGQIGDEKAYGYEHANNKTCGPSLKKLLSGSFLPKEKRPIFKNNGNANARVGCSTNLSDEPKFHNVVVVDDDDDDDKCNLSKGCQNLHWAHGRAGEDRLHIVICEDHGWIYVGIYDGFNGPDATDYLLNNLFYAVYEELKKIVGCQDSKSLVDGGSYFSSSFNKENNPTGNGNLKVERRNSRNCKKEVKLNAKLSEWDVLQGLSKALRITEAAFLKSSDEMIAQNPVLAMMGSCVLVMLMKGEDVYLMNVGDSRAEVRRIWREHPDDPSAVTKGRVKGYLNVTRAFGAGFLKQPKQNNAVLETFKVNYIGDSPYITCCPSLHHYRLGPNDKFLLLSSDGIFQYFTNEEAIFKVDYFITMFPDIDPAQLLIEETLHRAAKKAGMNFHELLDIPQGERRLYHDDISVVIISLEGKIWRSTV* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2366 566 ProSiteProfiles PPM-type phosphatase domain profile. 226 557 IPR001932 -
Amo14g2366 566 SMART PP2C_4 227 555 IPR001932 -
Amo14g2366 566 PANTHER PROTEIN PHOSPHATASE 2C 19 402 IPR015655 GO:0004722|GO:0006470
Amo14g2366 566 PANTHER PROTEIN PHOSPHATASE 2C 402 566 IPR015655 GO:0004722|GO:0006470
Amo14g2366 566 Pfam Protein phosphatase 2C 402 505 IPR001932 -
Amo14g2366 566 MobiDBLite consensus disorder prediction 79 101 - -
Amo14g2366 566 CDD PP2Cc 241 557 IPR001932 -
Amo14g2366 566 Gene3D - 403 563 IPR036457 -
Amo14g2366 566 Gene3D - 208 402 IPR036457 -
Amo14g2366 566 SUPERFAMILY PP2C-like 240 558 IPR036457 -
Amo14g2366 566 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 19 402 - -
Amo14g2366 566 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 402 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2366 Amo-Chr14 92730677 92734571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2366 16 566 PP2C-type Phosphatase Gene Family AT5G02400 39.412 2.22e-137 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2366 - K01102 gmx:100804061 622.854