LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo14g2365	ATGGCAAACTGTCACCGGAACAACGTCGGATCCCTCGTTCTCGGCCACCACCCTACAAAGTCCTCCGCCGCTACCGTTAGCGGCAACGTCCGCCTGTGGAACTCCCTCTCCGCCGCCTCCTTCCGCCGCATTATCTTCGACGCCCTCAGCTGCGGTGGCGCCGCTTACCGCCGGAATAATCACACCGACTCAGCCTCCTCCACCGACGGATCCGATTCCGACTRRGAATGCCCGAAACCTAACCCTAACKCGAAGCGCAATGTGAGGTCCGAGAAGCTCTCGGATCTCCTGAGCATGGCGGATTCGGAGGTGGACGCGGAAACCGAGACGAAGAAGAAGGAGGAGGCTCTTGACGACCTGAAGCGCCTCGTGTCGGAGCTTCAGGCGGAGGATTCGCCTCCGGTAAAGCGAGTAGCCGCAGCTTCCGCCGTGAGGAGGCTGGCGAGGGAGGACGCTGAGGTTAGAGTGACGTTCGCAATGCTCGGAGCGATTCCGCCGCTTGCAGCCATGCTCGATTTAGAAGACCTCGATTCTCAGGTAGCTTCGCTCTACGCGTTGCTTAACCTTGGAATCGGAAACGATGCAAATAAAGCTGCTATTGTGAAAGTTGGGTCTGTACACAAGATGTTGAAGCTAATTGAATCTCCAGATTCTGTGGAAACATCAGTTTCAGAAGCAATAGTTGCAAACTTTCTCGGATTGAGTGCTTTGGATTCGAACAAACCAATAATTGGATCCTCTGCAGCAGTACCATTCCTAGTTAGAACCCTCCAGAATTTAGATAATAAAACAAGCTCCCAAGCCAAACAAGATGCTCTCAGAGCAATGTACAATCTTTCAATCTTCCCAGGCAATGTTTCATTCATTTTGGAAACCAACTTGGTCCCATTTCTGATAAACTCCGTAGGAGATATGGAAGTAACCAACCGAGCCCTCGCAATCCTAAGCAACTTGGTGTCAACAAGAGAYGGTAGGAAGGCCACTAGTGCCGTCCCGGATGCTTTCCCTATCCTTGTGGATGTGTTGAATTGGACRGACTCACCGGAATGCCAAGAAAAGGCATCTTATGTTTTGATGATAATGGCYCACAAYTCTTATGGCGATAGGCAGGCCATGATTGAGGCTGGGATTGCGTCGTCACTCCTTGAGTTGTCCCTTCTTGGCACCACATTGGCACAGAAAAGGGCCTCAAGGATATTGGAATGTTTGAGGGTAGACAAAGGGAAGCAGGTTTCAGGGAGCTTTGGAGGGAATTTAGGCGCAACGGTATCCGCCCCAATCTGRGGATCGTCATCGTCTTGTGCAAAGATGGARGGAGGGGGAAAGGATGGTTCGGACGAGGAGGAGGAGATGATGAGRGAGGAGAAGAAAGCAGTGAAGCAGTTAGTCCAGCAGAGTCTGCAAAACAATATGAGGAAGATTGCTAAAAGGGCCAATTTGCCTCAAGATACTGTTCCTTCAGATCATTTTAAATCACTCACTGCAAGTTCAACTTCGAAGAGCCTGCCATTTTGA	1515	0.5056	MANCHRNNVGSLVLGHHPTKSSAATVSGNVRLWNSLSAASFRRIIFDALSCGGAAYRRNNHTDSASSTDGSDSDXECPKPNPNXKRNVRSEKLSDLLSMADSEVDAETETKKKEEALDDLKRLVSELQAEDSPPVKRVAAASAVRRLAREDAEVRVTFAMLGAIPPLAAMLDLEDLDSQVASLYALLNLGIGNDANKAAIVKVGSVHKMLKLIESPDSVETSVSEAIVANFLGLSALDSNKPIIGSSAAVPFLVRTLQNLDNKTSSQAKQDALRAMYNLSIFPGNVSFILETNLVPFLINSVGDMEVTNRALAILSNLVSTRDGRKATSAVPDAFPILVDVLNWTDSPECQEKASYVLMIMAHNSYGDRQAMIEAGIASSLLELSLLGTTLAQKRASRILECLRVDKGKQVSGSFGGNLGATVSAPIXGSSSSCAKMEGGGKDGSDEEEEMMREEKKAVKQLVQQSLQNNMRKIAKRANLPQDTVPSDHFKSLTASSTSKSLPF*	505

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo14g2365	504	Gene3D	-	112	254	IPR011989	-
	Amo14g2365	504	MobiDBLite	consensus disorder prediction	475	504	-	-
	Amo14g2365	504	MobiDBLite	consensus disorder prediction	440	458	-	-
	Amo14g2365	504	SUPERFAMILY	ARM repeat	119	396	IPR016024	-
	Amo14g2365	504	MobiDBLite	consensus disorder prediction	57	74	-	-
	Amo14g2365	504	Gene3D	-	260	413	IPR011989	-
	Amo14g2365	504	Coils	Coil	445	465	-	-
	Amo14g2365	504	MobiDBLite	consensus disorder prediction	485	504	-	-
	Amo14g2365	504	PANTHER	ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN	1	504	-	-
	Amo14g2365	504	Coils	Coil	103	130	-	-
	Amo14g2365	504	MobiDBLite	consensus disorder prediction	432	458	-	-
	Amo14g2365	504	PANTHER	ARM REPEAT SUPERFAMILY PROTEIN	1	504	-	-
	Amo14g2365	504	MobiDBLite	consensus disorder prediction	1	21	-	-
	Amo14g2365	504	MobiDBLite	consensus disorder prediction	57	87	-	-
	Amo14g2365	504	SMART	arm_5	324	363	IPR000225	GO:0005515
	Amo14g2365	504	SMART	arm_5	282	320	IPR000225	GO:0005515
	Amo14g2365	504	SMART	arm_5	193	236	IPR000225	GO:0005515
	Amo14g2365	504	SMART	arm_5	151	191	IPR000225	GO:0005515
	Amo14g2365	504	SMART	arm_5	237	281	IPR000225	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo14g2365	Amo-Chr14	92692339	92695949	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo14g2365	136	410	U-box Gene Family	AT1G67530	29.787	5.93e-29	119

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo14g2365	-		-	mtr:MTR_1g014420	642.499