Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2334 ATGCCCAAGCCTCTGAAGATGTTCCATTACGACCTCCTCGACGAGACGCAAAACAAGCTCGATTACATCCTCTCTCTCTCTCTCACTGTCGAGAACTTCCTCAAGCGCTGCCTCCATATTCTCATCTTCAAGTCCGGCATGGCCAAAGCATACAAGAAGCTTTCAGCCGTTGGATTGTGGGAGAGTAAAAAGAAAACCTCAGTGGAGGCACAACTCAAGATAATTGAGGAAAATTTGAAAAGAAAGAAAGCAGCATATGCAGAAAAGATGAAGAATAAGATAGCTGATATTCATAGGTCAGCAGAAGAGAAAAGGGCAATGGTTAAAGCTCAAAAGAGGGAAGAGTTTATCGAGTTAGAGGAAATAACTGCAAAGTTTTGTAGTAGTGGTCGTACACCAGCCAAATTCTTTGCATCTAACTACAAAAAGATCAGAATATCATTGGTG 447 0.4183 MPKPLKMFHYDLLDETQNKLDYILSLSLTVENFLKRCLHILIFKSGMAKAYKKLSAVGLWESKKKTSVEAQLKIIEENLKRKKAAYAEKMKNKIADIHRSAEEKRAMVKAQKREEFIELEEITAKFCSSGRTPAKFFASNYKKIRISLV 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2334 149 Pfam Remorin, C-terminal region 47 134 IPR005516 -
Amo14g2334 149 PANTHER OS02G0117200 PROTEIN 48 138 - -
Amo14g2334 149 Coils Coil 65 92 - -
Amo14g2334 149 PANTHER CARBOXY-TERMINAL REGION REMORIN 48 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2334 Amo-Chr14 89312482 89313589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2334 6 50 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 66.667 9.30e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2334 - - gmx:100815301 128.257