Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2295 ATGAAGAGAAATCATAGTTCCCACCACCAAGAACGGAAATGGGTCATACCCACCACAATCACAATAACCGTTCTCTTCATCACTCTCCTCCTCACACTTTCCGTTACCCACACCAAACCCTATTCAAATTCTCCCAATTTTACCCCTTTCCATGTTGATCGTTCGGGTTCCGACGACGGCGAAACGGGTCTTCCTACCTTGCCAAGGTTCGCCTACCTCCTCACGGGAAGCAAAGGGGACGCGCCGAGGCTCAGGAGAGTCCTTCAGGCAGTGTACCACCCTAGGAACTACTACCTGGTCCACCTCGATCTAGAAGCTTCCGATGCGGAGAGGCTAGAGCTTGCGAAGTATGTGAAGTCAGAGAGTGTTATGAGGGTGTTTGCGAACGTTATGGTTGTTGGGAGAGCTGATTTGGTCACCTACAAGGGCCCAACCATGATTGCTTCTACCCTTCATTGCGTTGCGTTGTTGCTCAAGAAGGTCAAGGACTGGGATTGGTTCATCAATCTCAGTGCCTATGATTATCCTCTCATGTCTCAGGATGATCTCTTCCATATCTTCTCATTCATACCCAGGGATCTAAACTTCATAGAGCACACTAGTAATATGGGTTGGAAAGAGTATCAGAGAGCAAAGCCTATAATCATAGATCCAGGGTTGTATCATTCTAAAAAATCTGGTCTCTTTTATGCTAAAGAGAAAAGATCAGTCCCAAATTCATTCAAGTTATTCACAGGCTCTGAATGGGTTATCCTAACAAAATCCTTTCTCGAGTTCTGTATTCGTGGTTGGGATAACCTTCCGCGCACTCTCCTTATGTATTATACAAATTTTTTTTCATCCCACGAAGGCTACTTCCACACTGTCATGTGCAATCACAAGGACTACCAGAACACCACCGTGAATCATGATTTGCATTATTTAAAGTGGGACAACCCGCCGAAGCAGGATCCAATGTTTTTGACGCTGGTGCATTTTGACAACATGGTCCAAAGTGGTGCACCTTTTGCTAGAAAGTTTAACAAGGATGATCCAGTTCTCGATAAAATCGATAAGGAACTCTTGAGAAGAAAAGATGGCTACTTTACTCCCGGTGGTTGGTGCATTGGCAGTGGGAAAGCTCCGTGTTCTGTTTATGGAAATCCAGTTGTAGTTAAACCAAGTATAGGCTCAAAGAGGCTTGAGAAACTAGTGGTTAAGATATTGGATTCGGAAAATTTTAGGCCGAAACAGTGCAAGTAG 1242 0.4477 MKRNHSSHHQERKWVIPTTITITVLFITLLLTLSVTHTKPYSNSPNFTPFHVDRSGSDDGETGLPTLPRFAYLLTGSKGDAPRLRRVLQAVYHPRNYYLVHLDLEASDAERLELAKYVKSESVMRVFANVMVVGRADLVTYKGPTMIASTLHCVALLLKKVKDWDWFINLSAYDYPLMSQDDLFHIFSFIPRDLNFIEHTSNMGWKEYQRAKPIIIDPGLYHSKKSGLFYAKEKRSVPNSFKLFTGSEWVILTKSFLEFCIRGWDNLPRTLLMYYTNFFSSHEGYFHTVMCNHKDYQNTTVNHDLHYLKWDNPPKQDPMFLTLVHFDNMVQSGAPFARKFNKDDPVLDKIDKELLRRKDGYFTPGGWCIGSGKAPCSVYGNPVVVKPSIGSKRLEKLVVKILDSENFRPKQCK* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2295 413 Pfam Core-2/I-Branching enzyme 70 328 IPR003406 GO:0016020|GO:0016757
Amo14g2295 413 PANTHER BETA-GLUCURONOSYLTRANSFERASE GLCAT14C 7 413 - -
Amo14g2295 413 PANTHER GLYCOSYLTRANSFERASE 7 413 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2295 Amo-Chr14 85175004 85183664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2295 69 413 Glycosyltransferase AT5G15050 60.345 4.44e-165 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2295 K20891 - tcc:18597777 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2295 14 85175004 85183664 Amo04g1070 04 46696729 46705251 hybridization