Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2281 ATGGGGATAAATGTGCAGTTCAGTGATGTGACATATAAGGTAGTGATGAAAGGAATGACAACAAGTGAGGAGAAGGATATACTGAAGGGTATAACTGGTTGTGTGAGTCCAGGGGAAGTTTTGGCATTGATGGGACCCTCAGGAAGTGGAAAAACATCACTGCTGAATCTTCTTGGAGGAAGAATAACTCATCACCCCACTGTTGGTGGATCTATCACCTACAATGACCAGCCTTATTCTAAGTTCCTCAAGAGTAGGATTGGATTTGTGACACAAGATGATGTTCTGTTTCCTCATCTAACTGTAAAAGAAACATTGACATATGCAGCCAGACTAAGATTGCCAAATACATTAACTCAGGAGCAAAAGGAACAACGTGCTTTAGATGTCATCTATGAGCTTGGTTTGGAAAGGTGCCAAGACACTATGATAGGAGGATCCTTTGTTCGAGGAGTATCTGGGGGAGAGAGGAAGAGAGTCTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTTCTTCTTGATGAACCAACTTCTGGCCTCGATTCTACAACAGCCTTGAGGATTGTTCAGATGCTACAACACATAGCAGAGGCTGGTAAAACGGTAGTGACAACAATCCATCAACCATCAAGCAGGCTCTTCCATAAATTTGATAAGTTGATCCTTTTAGGAAAAGGGAGCTTGATTTACTTTGGAAAAGCATCTGAAGCTATGTCTTACTTCCAGTACATAGGGTGTTCACCTCTCATCACCATGAACCCAGCAGAGTTTCTACTTGACCTTGCAAATGGTAACATAAATGATGTTTCTGTTCCATCAGAGTTAGAGGATAAAGTTCAAATGGGGAATTTGTCAGAAGCTGAAACTCGCAATGGGAAACCATCACCTGCACTTGTGCAAGAGTATCTAGTGGAGGCGTATGAGACTAGAGTTGCTGAAACAGAAAAGAAAAAGCTACTGGTTCCTATCCCCCTTGATGAAGAACTCAAGTCTAAGGTTCTTTGTTCTAAAAGACAATGGGGAGCAAGTTGGTGTGAGCAATTTTCCATCTTGTTCTTGAGAGGATTCAAAGAAAGGAGGCATGACTATTTCAGCTGGTTGAGAATCACACAAGTTCTATCCACAGCAGTCATCTTAGGATTGCTATGGTGGCAATCAGATGCTAAAAACCCAAAAGGCATGCAAGACCAGGCAGGACTACTTTTCTTTATTGCTGTGTTTTGGGGATTCTTTCCTGTCTTCACTGCAATATTCACATTCCCACAAGAGAGAGCAATGTTAAATAAGGAAAGAGCAACAGATATGTATAGACTAAGTGCATATTTTGTGGCAAGAACTACAAGTGACCTTCCATTAGACCTTATCTTACCAGTGCTTTTCCTCTTAGTTGTTTACTTCATGGCTGGATTGAGACTCAGTGCAGGACCATTCTTGCTTAGCATCCTTACAGTTTTTCTCTGCATAGTTGCAGCTCAGGGACTTGGACTTGCTATTGGGGCAACACTAATGGACTTGAAAAGGGCAACAACATTGGCTTCAGTTACTGTAATGACTTTCATGCTTGCTGGAGGCTTTTTTGTGAAGAGGGTGCCGATATTTATATCATGGATCCGGTACATATCTTTCAACTACCACACGTACAAACTTCTGCTGAAGGTGCAATATGATGAAGAAGTGACACCAATGATAAATGGAATCAGAATTGATAGTGGCTCAACAGAGGTGGTTGCTCTGATAGCAATGGTTTTTGGTTACCGTCTATTGGCATATCTTTCCTTGCGTTGGATGAATGTTTCATAA 1806 0.4147 MGINVQFSDVTYKVVMKGMTTSEEKDILKGITGCVSPGEVLALMGPSGSGKTSLLNLLGGRITHHPTVGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPNTLTQEQKEQRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLLLDEPTSGLDSTTALRIVQMLQHIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLIYFGKASEAMSYFQYIGCSPLITMNPAEFLLDLANGNINDVSVPSELEDKVQMGNLSEAETRNGKPSPALVQEYLVEAYETRVAETEKKKLLVPIPLDEELKSKVLCSKRQWGASWCEQFSILFLRGFKERRHDYFSWLRITQVLSTAVILGLLWWQSDAKNPKGMQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERATDMYRLSAYFVARTTSDLPLDLILPVLFLLVVYFMAGLRLSAGPFLLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKRVPIFISWIRYISFNYHTYKLLLKVQYDEEVTPMINGIRIDSGSTEVVALIAMVFGYRLLAYLSLRWMNVS* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2281 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 246 IPR027417 -
Amo14g2281 601 Pfam ABC-2 type transporter 348 557 IPR013525 GO:0016020|GO:0140359
Amo14g2281 601 Gene3D - 4 246 IPR027417 -
Amo14g2281 601 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 598 - -
Amo14g2281 601 Pfam ABC transporter 28 180 IPR003439 GO:0005524
Amo14g2281 601 SMART AAA_5 37 229 IPR003593 -
Amo14g2281 601 ProSitePatterns ABC transporters family signature. 152 166 IPR017871 GO:0005524
Amo14g2281 601 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 5 252 IPR003439 GO:0005524
Amo14g2281 601 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 3 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2281 Amo-Chr14 84452693 84455226 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2281 27 281 Calmodulin-binding Proteins AT2G36910 27.203 7.45e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2281 K05681 - gmx:100800934 1024.62