Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2250 ATGGAAGACCACCGTCATAGAAGACAGCCGCTTCTTCTTTCTGTGCCGGCGACAGAAGGGGATGATTTGGTGACCCCTCAGTCCATAGGTGAGAATGCGGTGGATGGAGAAAAATCAAGTGCTGCGGCGGCTTTGGCGGCGGCTGCTACTGCAGGCCGAATGAAGAATCCGTCAGTGAAATCGAAATCAGGACCTAAGACAGCATGGCGGAAGCTCCTTTCTCAGTGTTCTCAGATGATCAACCTGCTAAAAGCAATTATGAAAACTCCTCATTGTATGTGTTGGAATGTTAGCATGTGTGGCTTGCAAAATATTCTCCAAGACTATTCTCAAAACTGGCTCCCTTCAAATTCTGTAATTGAGCAAAACCCGGCTTTCTTCAACACTAGAGACATTGTCATCTTGAAGATTATTCCCGGCTTCCCTATTCTTACCAAGGTGAATTACATGCGTTCTTTTACTTCCATTGAAGCTGAGCAATCCATTCGGTCACAACATAAAGGAATTCTGAGAAACATGACAATGATAATAACAGCAACAGAGGAAGAGTGCCATGACACACTGATTGATATAGAGAGCAGCCTCAATGAGCTTCATCAAGTGTTCTTGGACATGATTGTTTTGGTCCAATCACAAGGTAAGCAACTCAATGACATACAAAGCCACGAGTCAAGAGCCAATTCGTATGTCTGCCGTGGGTCCGGCAGTTTTAGTTTGCAAGGAAGCACCAGAAGAATACCGGAAGTCCATCTTCATTGCCATCATAATATTGATTTATTATATTGA 786 0.4389 MEDHRHRRQPLLLSVPATEGDDLVTPQSIGENAVDGEKSSAAAALAAAATAGRMKNPSVKSKSGPKTAWRKLLSQCSQMINLLKAIMKTPHCMCWNVSMCGLQNILQDYSQNWLPSNSVIEQNPAFFNTRDIVILKIIPGFPILTKVNYMRSFTSIEAEQSIRSQHKGILRNMTMIITATEEECHDTLIDIESSLNELHQVFLDMIVLVQSQGKQLNDIQSHESRANSYVCRGSGSFSLQGSTRRIPEVHLHCHHNIDLLY* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2250 261 Gene3D - 187 237 - -
Amo14g2250 261 PANTHER T-SNARE-RELATED 183 233 - -
Amo14g2250 261 Pfam Syntaxin 182 213 IPR006011 GO:0016020
Amo14g2250 261 MobiDBLite consensus disorder prediction 1 20 - -
Amo14g2250 261 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 178 240 IPR000727 -
Amo14g2250 261 SUPERFAMILY SNARE fusion complex 170 233 - -
Amo14g2250 261 CDD SNARE_syntaxin1-like 182 233 - -
Amo14g2250 261 SMART tSNARE_6 173 242 IPR000727 -
Amo14g2250 261 PANTHER SYNTAXIN 183 233 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2250 Amo-Chr14 81980646 81982773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2250 159 245 SNARE and Associated Proteins AT1G61290 45.652 1.76e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2250 K08486 - aip:107605994 187.963