Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2247 ATGGTTTTGCAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGGTCTATGGGGCTGGTGATGATTTGTTTAAAGAGCTATGGAGGCTGTGTGCAGGGCCATTAATGGATGTTCCTTGTGTTCAAGACAGAGTTTTCTATTTCCCTCAGGGTCACATTGAATTGATGAAGAACCAGAAATCTCCCAAATACGATCTTCCATCGAACAAGATATTTAAAAAACAAGATTTTTTTCTCATCTATCAGAAGGTTAATAATTTTTATTAG 324 0.3673 MVLQIDEELLQEVVNMGFDRNQLVESLCNRIQNEVYGAGDDLFKELWRLCAGPLMDVPCVQDRVFYFPQGHIELMKNQKSPKYDLPSNKIFKKQDFFLIYQKVNNFY* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2247 107 PANTHER AUXIN RESPONSE FACTOR 11 32 86 - -
Amo14g2247 107 CDD UBA_SnRK1_plant 5 35 - -
Amo14g2247 107 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 4 45 IPR015940 -
Amo14g2247 107 Pfam UBA/TS-N domain 5 34 IPR015940 -
Amo14g2247 107 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 32 86 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2247 Amo-Chr14 81574735 81575757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2247 42 87 B3 DNA Binding Superfamily AT5G62000 56.604 6.50e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2247 K14486 - ahf:114925841 171.014