Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2238 AGAATAATGGAATTGATAGAGAAAGTAGTTGTTTATCCCGAGCAATCCACTCTTAAAAAGCGAATTTTCTTGTCCAATATCGACTTATGTCTTGTTGTTTACCAGGACACTGTCTTCTTCTTTGATCCTCCAACTAGCGAAATGAGTTTTTCTGAAATTTTCAACAAATTATGCAATGCATTTGGTAAATTGCTTGTGCATTATGACTTTATGGCTGGCCGACTTGTGCAAAGTTTGGAGGACAGTCATCGGTTTGAAATAGACTGTAATGATGCTGGTATTGTGGTTATTGCTGCAAGAACTAATAGAAAGTTGAGTGAATTTGGTGATATTTTTGCACCTAATCAAGATTTAGAGGAATTGGCTATGTTCCTCCAAGGAAAACAGGAAGAAGAAATCGACTTGAAAGAGAAACCCCTTTTATCGGTACAGTTGACGCAATTTGCTTGCGGGAGTTTGGCATTAACTGCTCACTACAATCACTGCACACTAGACGGTTTAGCAGTAAGAGATTTCGGGGCAAACTTGGCTGCATTAACACGTGGTGATTCCCTAATCGTAGTTCCTTTTACAGATAGGACATTGCTAAGAGCAAGAAACCCACCAAGGATTAGTTACCCACATTTTGAGTATGGAAAAGCTACAAACATTGAAAACTTGTTTAGTGTTCGTGGAACAAGTGGTGGCATTAATGTAAGACAAAATGTGACACAAAACCAAATCCAGATTCTTTATTTGTCTCCACAGCAAATTGCCAGCTTTAAAATGAAAGCTATTAAGGATTGTAACTTAAAGAATGTGACTACTTTTCATGTTGTTGCCGGTAAAATATGGAAGGCGAGAACTATTGCGATAAAGATGTCAGATGATCAAGTGTCGACAATGTTGTTTCCTGTGGATATTAGGAAAAGAGTTTCTCCAGAACTTCCATACGGCTTTGCAGGCAAGGATGAAATACATATGAGAATATTTTTAACAAAAAAATGCAATGCTTTGGTTCCTGGATTTGCAAGAGCAACTGTGAAGGAGCTCACAGAATTAGAGGATGCTTATCATATCATAAAAGTACAAGAAGGAATTGAAAGGTTGGATGACGAGTATATTAAGTCAAGCATAGATTGGTTAGAATTGAACAAAGGAGTGCCTCGTAGGGAAGATAGTTTCTCATTGGTTTCAGGGTTGAGATTGGGGATTGGGGACCAACATTTTGCATGGGGTAAACTAAAATGTTCAACACCACTTACTGTTAAGCCAGGTCTAGTCATGCTATTACCAGCAGCACCAGGTGATGGAGGTCTTAATGTCTGTCTGGATTTACTAGAAGATCAAATGTACATATTTCGTAGGATAATGCTGGAATTCTAA 1365 0.3817 RIMELIEKVVVYPEQSTLKKRIFLSNIDLCLVVYQDTVFFFDPPTSEMSFSEIFNKLCNAFGKLLVHYDFMAGRLVQSLEDSHRFEIDCNDAGIVVIAARTNRKLSEFGDIFAPNQDLEELAMFLQGKQEEEIDLKEKPLLSVQLTQFACGSLALTAHYNHCTLDGLAVRDFGANLAALTRGDSLIVVPFTDRTLLRARNPPRISYPHFEYGKATNIENLFSVRGTSGGINVRQNVTQNQIQILYLSPQQIASFKMKAIKDCNLKNVTTFHVVAGKIWKARTIAIKMSDDQVSTMLFPVDIRKRVSPELPYGFAGKDEIHMRIFLTKKCNALVPGFARATVKELTELEDAYHIIKVQEGIERLDDEYIKSSIDWLELNKGVPRREDSFSLVSGLRLGIGDQHFAWGKLKCSTPLTVKPGLVMLLPAAPGDGGLNVCLDLLEDQMYIFRRIMLEF* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2238 454 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 4 452 - -
Amo14g2238 454 Gene3D - 3 213 IPR023213 -
Amo14g2238 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 452 - -
Amo14g2238 454 Gene3D - 231 454 IPR023213 -
Amo14g2238 454 Pfam Transferase family 4 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2238 Amo-Chr14 80882745 80885475 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2238 7 453 Monolignol Biosynthesis Gene Families AT5G48930 28.070 5.47e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2238 K15400 - gmx:100801822 595.89