Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2192 ATGACAAGCCCAACTGTATCGAAGAATCGCAACGGCCTTCGTTCCATGTTACAAGTGAATTTGCAGCAGGCATATCATCATGACATGATGAAAAATAGTAATGATGAATCCTCTAACAGTAACAGCAGTCCCTACTACAAAGGCCTCACCGATCAATCCCTTGCCATCTTTGCACCCTCATCTCCACCTCATCATCATCATGATCATGCTACCATTCCTTGCTACCCTATTACTCCTCTTCCTCTCCCCAGCCTTCATCCTCACCTCTCATCATCCGGATCTGGGGCGCAGGGGCAAAGTCCGTACTACAAGGGTCTTACCGATTATTCCCTTGTTATTGGTTCTTGGAGCAGCCACAATCCTACTTCCACCAATCCATCATACCACCCTCAGTCTAGCCCTTACTACAGGGGCCTCACGGATTTCTCCCTTGTCCTTCACGATCATCCTCAGGAGACAGAGATTGATCCCAATGATGGTGAGGTTGAGGGCGACTTAGTACTGATCCAAGAAGATCATAAGACAGTATTAACAGAAGAGGTTAATGCCAAAGGGGTTCTATTAGTGGAGATGGAGGTTATTGATGCCACCCATGAAGAAGAGAAACCATTGAGGGAGAGAGTGACAGTAACACCGGATGATGATGATTTACAAGACACAAGGACGAAGGAGGATATTTATCATCATCATCAGGAAATAACATCACTACAAGAGGACCCAAATGCATACCAATATGAATGGGCAACCAAACACCAGCCCCAAACCTTGGAAGAATTCATCTGCAACTCTGATAAAGCACTCCAACTCCAAGCATTAGTAAGAGAGGGTTGTGGCTGTAATCATTTTATATTTGAGGGACCCCCCAACGTAGGAAAGAGATCCATGATCCGGGCTATGCTTCGCGACCTATTCGGCCCTCAGAGACTGCAGGTCATAGAAGAATCCAGAGACTTCACCTTGAAGGGAGAAATGGTTGACAAGCTGCAAGTGCAGATAAAAAAATCACTGCATCATGTGGAGATCAATGTCTCAGAGACAAAGGGGTACGAAAAACACGTAATTGCGGATTTATTCAACGGAACATATGCCAAGACGATAAATAACTCCCTGCCTTGTAGCCCAGATAACTGCCAAGGTGCGCTCTCTGACTTATATATATGTTGTGATGGTTACTTGAAAGGGAGTTGTATTTGA 1194 0.4514 MTSPTVSKNRNGLRSMLQVNLQQAYHHDMMKNSNDESSNSNSSPYYKGLTDQSLAIFAPSSPPHHHHDHATIPCYPITPLPLPSLHPHLSSSGSGAQGQSPYYKGLTDYSLVIGSWSSHNPTSTNPSYHPQSSPYYRGLTDFSLVLHDHPQETEIDPNDGEVEGDLVLIQEDHKTVLTEEVNAKGVLLVEMEVIDATHEEEKPLRERVTVTPDDDDLQDTRTKEDIYHHHQEITSLQEDPNAYQYEWATKHQPQTLEEFICNSDKALQLQALVREGCGCNHFIFEGPPNVGKRSMIRAMLRDLFGPQRLQVIEESRDFTLKGEMVDKLQVQIKKSLHHVEINVSETKGYEKHVIADLFNGTYAKTINNSLPCSPDNCQGALSDLYICCDGYLKGSCI* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2192 397 PANTHER OS10G0574500 PROTEIN 37 365 - -
Amo14g2192 397 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 37 365 - -
Amo14g2192 397 Gene3D - 245 377 IPR027417 -
Amo14g2192 397 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 244 354 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2192 Amo-Chr14 72905512 72907556 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2192 247 359 Core DNA Replication Machinery Family AT5G27740 28.070 2.56e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2192 K10756 - aip:110268739 478.789