Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2174 AGCTGCGTCTCTGAAGGCTCCTTCTCTGCATGCTACCTCTCCCAAAGCTACTTCTTCCAGGGTTGTTCATCACCACAAGGAGATAAGGTTCAAGCAAACTCAGATCAGGCTATGGTTTGGAATCAGCTCAAAGCAAGATCCTTCCAGTTCAATGAAGAAATGATGGAGTCGCTTTTTGGATATAATGCTGCTCAAGAAAAATCTAAACCCGGAATGAAGAAAGAATCTCGTGAACAAACTCCTCAATATATTCAGATCATTGAACCAAAGAAAGCAAAGAATTTGTCAATTCTTCAAAACTTACTCAGAAATGGGGTACATTACACTCAACCTCATGATTATATACTAAAGATAAAAGCTCAATCATTCATTACTCTTTTTCTTTGTTATTTTTCTTGTAAATTTTTAAGATCAGATGTATGTTTACTCACATAA 435 0.3632 SCVSEGSFSACYLSQSYFFQGCSSPQGDKVQANSDQAMVWNQLKARSFQFNEEMMESLFGYNAAQEKSKPGMKKESREQTPQYIQIIEPKKAKNLSILQNLLRNGVHYTQPHDYILKIKAQSFITLFLCYFSCKFLRSDVCLLT* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2174 144 Gene3D Formin, FH2 domain 25 125 IPR042201 -
Amo14g2174 144 Pfam Formin Homology 2 Domain 28 100 IPR015425 -
Amo14g2174 144 SUPERFAMILY Formin homology 2 domain (FH2 domain) 33 103 - -
Amo14g2174 144 PANTHER FORMIN-LIKE PROTEIN 3 28 99 - -
Amo14g2174 144 PANTHER FORMIN-RELATED 28 99 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2174 Amo-Chr14 70099709 70103941 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2174 28 98 FH2 protein (formin) Gene Family AT5G54650 54.930 2.20e-21 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2174 - - aip:107625410 144.05