Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2173 ATGTGCATAGAATCAGAATATGAAGTGTTGATTGTTGGAGATATACTAGATCAAGATGAAGAAGAAATTGCTATCTTGTCCTTGTTGCGATCATTGGATAAACAGGCAAAGGCAAAAGGTGGAGCTGTGTTTCAGGTCCTTCTTAAAGGCCCAAAGAACTTCAGGAGAGCTGTGAAACACTTGGGTCCTGCTCCTGGTGTTCCTTATAGCTATATCAAGCCTTATGTACGATCTAAGGGAAGCAAGTTTGAGAAGGTTAGAGGAAGGAAGAACAGCAAACGACTTGGGGTTTAA 294 0.415 MCIESEYEVLIVGDILDQDEEEIAILSLLRSLDKQAKAKGGAVFQVLLKGPKNFRRAVKHLGPAPGVPYSYIKPYVRSKGSKFEKVRGRKNSKRLGV* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2173 97 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 44 93 - -
Amo14g2173 97 PANTHER 60S RIBOSOMAL PROTEIN L18 44 93 IPR000039 GO:0003735|GO:0005840|GO:0006412
Amo14g2173 97 Pfam Ribosomal protein 60S L18 and 50S L18e 41 94 IPR021131 -
Amo14g2173 97 Gene3D - 8 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2173 Amo-Chr14 70014443 70015174 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2173 46 93 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 70.833 3.75e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2173 K02883 - aip:107622497 97.0561