Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2156 ATGGATACACCAATTTTTGAAGAAGCATTGTACGGCAGTGCTTATGACATGAGGGAGGATTCTAATTCCACCGACGTTAATGTTCTGTGTTTGAGTGAAGATGACACACCACATGGAAAAGAATCTGAAGACGCTATTCAGAAAAAGGATGATGCTACGCGAGCACAAGAGTTCTATTCTAATTATGCAAAGAAAGTTGGGTTTGTGACGAGGATTAGGAATACAAACTTTGACAAGACCAGGAAGGAATTAAAGGTACCTATTAATCAATCGATACACTGTAATCGTGAAGGTTATCGGGAGTCTCGAGTGAAGGCAGCAATGCGGGTAAAGAGAATAACAACAGTTGGGTGCAAAGCAAGGATGTACGTGATGCTTGATAGGCATAATGATAATTGGCTGGTGACCAAATTAGAATTGAAGTACACCCACGCGTGTTCTGCCGAGCAAGCTGTGCATTATAACCTTTACGAAGATCGTCGAATGTGGGTTCTAATATATTTCCAAGGTGAATTTTGGGCTGGTATGAGAAGTACCCAACGGAGTGAGAGTATGCACGCCTTTTTCGGTGGTTACCTGCATTGTAAAAGTGGAGTGGTTCAGTTCGTGCATGAGTATGACAATGTGCTTGGGAACAAAGAGCAAAAAGAACTGGAGGATGATGCTGCAGACTCTAAAGGAGTTGTCCCATGTTCATCGAGCTCTACAATTGAAAGACAATTTCAGCATGAGTACACAACCTCTAAGTTTAGAAAAGTCCAACATGAATTCAGTAAAAGAGGGGATTGTTTAGTCCGTGGGGTCACTCAAGAGGACACAGTACCATCTTACTATGTTATCCCTCGATGGAGCAAGAATGTACAGCGAAAACACACTTTCATCAAGAGCAGCCATGACGAGAAGCGATCAGACGAAAGTCACAACTTATTTAGACGACTGTGTTCACACTTCTACAATGTAGCACAAGATTTTGTGACATGTGAAGAAGAAGCGGCCATGTTACATTCGGGTCTTGATCAGTTAAGGTCAAAGTTGCTTGATTGTCGTGCGAACTTGGTGTCCAGGCGTGTTCCAAGTTCACAAAATAGCACGGTCACACAGGGCGACCCCCCTTCTTGGTGA 1122 0.4305 MDTPIFEEALYGSAYDMREDSNSTDVNVLCLSEDDTPHGKESEDAIQKKDDATRAQEFYSNYAKKVGFVTRIRNTNFDKTRKELKVPINQSIHCNREGYRESRVKAAMRVKRITTVGCKARMYVMLDRHNDNWLVTKLELKYTHACSAEQAVHYNLYEDRRMWVLIYFQGEFWAGMRSTQRSESMHAFFGGYLHCKSGVVQFVHEYDNVLGNKEQKELEDDAADSKGVVPCSSSSTIERQFQHEYTTSKFRKVQHEFSKRGDCLVRGVTQEDTVPSYYVIPRWSKNVQRKHTFIKSSHDEKRSDESHNLFRRLCSHFYNVAQDFVTCEEEAAMLHSGLDQLRSKLLDCRANLVSRRVPSSQNSTVTQGDPPSW* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2156 373 Pfam FAR1 DNA-binding domain 57 146 IPR004330 -
Amo14g2156 373 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 55 151 IPR031052 GO:0006355
Amo14g2156 373 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 155 265 IPR031052 GO:0006355
Amo14g2156 373 PANTHER OS03G0843700 PROTEIN 55 151 - -
Amo14g2156 373 PANTHER OS03G0843700 PROTEIN 155 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2156 Amo-Chr14 67457454 67463592 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo14g2156 FAR1 6.5e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2156 - - aip:107606714 365.155