Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2155 CAACTACTGAAAAGCGGAAGAGGAACTGATGTTAGTTTTGAAGTGAATGGAGAAATTTTTGCGGCCCATAAATTGGTACTAGCTGCACGGTCACCCATTTTCAGAGCCCAAATTTGTGGTCCTGTGAAAGATCAGAATACTGATTGTATAAATACTGGCTACAACTTTAGCATTAGCAGAGCAGCATCATTGTTTTCAGCTGAAAGCAGTCTGTCTCAAGTTTATTGTAACCTCCGAAAACCTCAGAGCTGTGTCGCCGCTGTCGAATCTGGTCCAGCCGCCGTCCCCACTCCCACTGCTCCAGCACCGTCGCAGCTTGTCTATCGTCGGGTTGCTTCACCTCTGTTCCATGGCCGTTGTCTATTCCATTTCTGTCGCCTGTGCCCCACTTCTCCTTCTCCCTCATCTCGGTTTGAGTTCTGGCCCGCATCTGAGTTTGAATTCCGCTTATTGACAAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGGCTGTGTGCAGGGCCATTAATGGATGTTCCTTGTGTTCAAGACAGAGTTTACTATTTCCCTCAGGGTCACATTGAATTGTTGCCAGAACCTACAGAACAAGATTTGAGGCAGATAAAGAACAAGAAATCTCCCAAATACGATCTTCCGTCGAATAAGATATTTAAAGAACAAGATTTTTTTCTCTTCTTCTATCAGAAGGTTAATAATTTTTATTAG 756 0.4325 QLLKSGRGTDVSFEVNGEIFAAHKLVLAARSPIFRAQICGPVKDQNTDCINTGYNFSISRAASLFSAESSLSQVYCNLRKPQSCVAAVESGPAAVPTPTAPAPSQLVYRRVASPLFHGRCLFHFCRLCPTSPSPSSRFEFWPASEFEFRLLTKSFFRKWLIWDLTEINWLNLYATGSKMRLCAGPLMDVPCVQDRVYYFPQGHIELLPEPTEQDLRQIKNKKSPKYDLPSNKIFKEQDFFLFFYQKVNNFY* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2155 251 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 1 51 IPR045005 GO:0016567
Amo14g2155 251 Pfam BTB/POZ domain 2 48 IPR000210 GO:0005515
Amo14g2155 251 SUPERFAMILY POZ domain 2 51 IPR011333 -
Amo14g2155 251 Gene3D Potassium Channel Kv1.1; Chain A 1 67 IPR011333 -
Amo14g2155 251 ProSiteProfiles BTB domain profile. 9 36 IPR000210 GO:0005515
Amo14g2155 251 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2155 Amo-Chr14 67118888 67122486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2155 180 249 B3 DNA Binding Superfamily AT1G43950 44.286 5.25e-11 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Amo14g2155 BTB 1.1e-08 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2155 K10523 - aip:107636513 154.836