Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2088 ATGCTAAGTCGCCCTCTTGCACTGATCGTAGCGCGCCGCCCAGAACGTTCATCTACCTTCGTATTGTCTCTACTCTCACCGTTACTTCTCACCCTTGTTGTCTCTGTGCCGACCGTCGCCGCGCGCTTAGCATCATTGTTCTCTCTGCTCACCATCGTCGAGAAGGCAAAATGGGCGTTGAGGGCGTTGAGGGCAGTGGTGAGGCTGCAGGCTATATTTTACGGAAGGCTAGTGAGGAAGCAAGCTGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTTCGAGTTCAAGCTCGCGTCCGCGCTAGGAATGTGAGGAACTCTCCAGAAGGGAAAGCCGTGCAGACACTATTAGATCAGTACCGCAACCAAGCTGATCCTATTAAGGAGGCTGAGACATCAATATGTATCATTGCCAACTTGCTTATTCTGTTATTCGTGGTTAAGGTTGAAGGCGAAAGTTTTTGGTTAAGGTTTTGTTATATGCCAAAGGATTGGATGGATCTACCGAGGTATAGCGAAGAGTATATCAATGGTGTTATTAGTTTTTTAGACTTTGCATACTCTGAGGGAGAACCGGACGGACGACAAATTCCTTGTAAGAGGTGTTGTAACATTAATTGGGATATTGAACATGGATTAATCATGGCGAATGGGCAATCCTGA 663 0.4721 MLSRPLALIVARRPERSSTFVLSLLSPLLLTLVVSVPTVAARLASLFSLLTIVEKAKWALRALRAVVRLQAIFYGRLVRKQAAVTLRCMQALVRVQARVRARNVRNSPEGKAVQTLLDQYRNQADPIKEAETSICIIANLLILLFVVKVEGESFWLRFCYMPKDWMDLPRYSEEYINGVISFLDFAYSEGEPDGRQIPCKRCCNINWDIEHGLIMANGQS* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2088 220 Pfam Transposase-associated domain 163 210 IPR029480 -
Amo14g2088 220 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 42 123 - -
Amo14g2088 220 ProSiteProfiles IQ motif profile. 64 91 IPR000048 GO:0005515
Amo14g2088 220 PANTHER IQ-DOMAIN 5-RELATED 42 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2088 Amo-Chr14 59969350 59972443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2088 56 135 IQD Protein Family AT1G72670 61.250 5.49e-22 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2088 - - aip:107640854 179.104