Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2036 ATGAGGAAGCCATGCTGTGAAACCAACAAAGACATGAACAAAGGAGCTTGGTCCAAACAAGAAGACCAAAAACTCATTGACTATATCAACAAACATGGCGATGTTTGCTGGCGTACCCTCCCTCAAGCTGCAGGTCTATTAAGGTGTGGCAAAAGCTGTAGGCTAAGATGGATAAACTATTTGCGCCCAGACCTTAAAAGAGGCAACTTTGCTGAAGATGAAGAAGATCTCATCATCAAGCTTCATGCACTTCTAGGCAACCGGTGGTCACTAATAGCGGGAAGATTGCCGGGACGGACGGACAATGAAGTGAAGAACTATTGGAACTCTCACATAAGAAGAAAGCTAATTAGCAAAGGCATTGATCCAAATAACCACCGTTTAATAACCCAAAAAAATCTAATCCCTACTCCACCCATTTCCGATTGTTCAAACTCATCATCGTCTGGCTTATTGAAAAAGAAAAACAAGAATAATGATGAGGCAACAACCAATAAATCCAATAACATTCATAACTATAGTTATCATCAAGTAGTCTCATCAGAAGAGGATGAGTCTAATAATAATAATAATAACAATAAAGGCTTATTATTGCCGGATTTAAACCTTGATCTCACTATCAGCATTCCTTCATCATCATCAGCTGAAAACAACGATCTCAAACCAACAACGATTCATCATGAATCAAATTCTTCAGGGCGGGAACGGAACTTGATGATGGCT 723 0.3956 MRKPCCETNKDMNKGAWSKQEDQKLIDYINKHGDVCWRTLPQAAGLLRCGKSCRLRWINYLRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRRKLISKGIDPNNHRLITQKNLIPTPPISDCSNSSSSGLLKKKNKNNDEATTNKSNNIHNYSYHQVVSSEEDESNNNNNNNKGLLLPDLNLDLTISIPSSSSAENNDLKPTTIHHESNSSGRERNLMMA 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2036 241 CDD SANT 69 112 IPR001005 -
Amo14g2036 241 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Amo14g2036 241 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Amo14g2036 241 PANTHER MYB TRANSCRIPTION FACTOR 2 227 - -
Amo14g2036 241 MobiDBLite consensus disorder prediction 130 172 - -
Amo14g2036 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Amo14g2036 241 CDD SANT 16 61 IPR001005 -
Amo14g2036 241 MobiDBLite consensus disorder prediction 212 227 - -
Amo14g2036 241 SMART sant 66 114 IPR001005 -
Amo14g2036 241 SMART sant 13 63 IPR001005 -
Amo14g2036 241 MobiDBLite consensus disorder prediction 130 153 - -
Amo14g2036 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Amo14g2036 241 MobiDBLite consensus disorder prediction 212 241 - -
Amo14g2036 241 Gene3D - 7 66 - -
Amo14g2036 241 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 227 - -
Amo14g2036 241 Gene3D - 69 135 - -
Amo14g2036 241 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Amo14g2036 241 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Amo14g2036 241 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2036 Amo-Chr14 55092942 55094508 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2036 2 210 MYB Transcription Factor Family AT4G38620 55.093 2.35e-77 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Amo14g2036 Myb_DNA-binding 2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2036 K09422 - gmx:100814923 287.345