Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2010 ATGCTTCCAAATGATATTATTACAGATGGTAGAAGCAAGGCTTCCATGAAGATGGGACTTGCACTCGGACTAGCTACTGCAATTACTCTGCTGTTAGTGATGGTCACCCTCTACTACACGAGACGGAAGAAGCAAAACCCGAAACACCTTCTGGTTGATGCCTTTTTGGAGAGGCATGGACACCTTCAAATCAAGAGGTACAGCTATTCCGACATGAAGAAAGTGACCAACTCCTTCAAAAACAAACTAGTGAAGATCCTAAGTGAATTGAAAGGTGATGGTGAAGATTTCATCAATGAAGTTGTGAGCATGAGCAGAACTTCTCATGTTAACATTGTTGCTCTTCTTGGCTTTTGCTTTGAAGGTTCTAAACAAGCTTTGGTTTATGACTTTATGCCTAATGGGTACAATGACTTCTCATAG 423 0.4113 MLPNDIITDGRSKASMKMGLALGLATAITLLLVMVTLYYTRRKKQNPKHLLVDAFLERHGHLQIKRYSYSDMKKVTNSFKNKLVKILSELKGDGEDFINEVVSMSRTSHVNIVALLGFCFEGSKQALVYDFMPNGYNDFS* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2010 140 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 83 IPR045874 GO:0004672
Amo14g2010 140 PANTHER RUST RESISTANCE KINASE LR10-RELATED 84 135 IPR045874 GO:0004672
Amo14g2010 140 SUPERFAMILY Protein kinase-like (PK-like) 66 135 IPR011009 -
Amo14g2010 140 Pfam Protein tyrosine and serine/threonine kinase 81 135 IPR001245 GO:0004672|GO:0006468
Amo14g2010 140 Gene3D Phosphorylase Kinase; domain 1 52 132 - -
Amo14g2010 140 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 15 83 - -
Amo14g2010 140 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 84 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2010 Amo-Chr14 52272609 52273472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2010 1 135 Receptor kinase-like Gene Family AT5G39030 38.608 5.14e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo14g2010 PK_Tyr_Ser-Thr 9.8e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2010 - - ahf:112712060 228.794