Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1977 ATGGGCGACGGCAAGGTATCCGCGACGCTCTCTTCTCCTCCAAGCCCTCCGATTCCAAAGCCTCCCCTCTGCCTCGTCTCCCCCTCGTCACTAGGGTCGCCCTCCTCGCCGATCTCCTCTGCATCGTCAGTGTCGTCTCTCTCTCTGCTCCCAACGCTAACTGCAATGGTTGACGACGAACCCGTTGATCAAAAGAGATATCTCGAAGACTCTTGCAAACCAAAGTGTGTCAAACCATTACTTGAATATCAGAGGGTTGCCATGGCGATTTCTCCATCTGGTATAAACCCGGCAGTTGGCTCAAAACTCTCTCCTGGTTCTCCAGAGGCTCTTACACTAGCCAACTGGATCTGCTGCAGTTATAGGCAATCAGTGCCGGTGTTTATCTTTGCAAACCAGGCTGGCCTTGACATGTTGGAAACAACTTTGGTGGCTTTACAAGACATCACATGGGTATTTAGAGGAAGACATGTTTGGAAAGTGCATTGGGTTTCTCAAATTTTTCGTGAGGCTTCTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAATTCTCTTCATGGCTTAGTTGTGCCTCTGACAGGTTGA 594 0.5 MGDGKVSATLSSPPSPPIPKPPLCLVSPSSLGSPSSPISSASSVSSLSLLPTLTAMVDDEPVDQKRYLEDSCKPKCVKPLLEYQRVAMAISPSGINPAVGSKLSPGSPEALTLANWICCSYRQSVPVFIFANQAGLDMLETTLVALQDITWVFRGRHVWKVHWVSQIFREASLSPLSLSLSLSLSNSLHGLVVPLTG* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1977 197 MobiDBLite consensus disorder prediction 1 41 - -
Amo14g1977 197 PANTHER ARID DNA-BINDING DOMAIN, ZINC FINGER, CCHC-TYPE, MEKHLA-RELATED 84 121 - -
Amo14g1977 197 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 118 150 IPR044830 GO:0003700
Amo14g1977 197 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 84 121 IPR044830 GO:0003700
Amo14g1977 197 Pfam MEKHLA domain 117 151 IPR013978 -
Amo14g1977 197 PANTHER ARID DNA-BINDING DOMAIN, ZINC FINGER, CCHC-TYPE, MEKHLA-RELATED 118 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1977 Amo-Chr14 49523133 49526349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1977 84 150 Homeobox Transcription Factor Family AT5G60690 53.922 1.56e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1977 K09338 - aip:107640931 125.176