Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1973 ATGTCTGTTCATCAAAATTATAAATGTATTTTCTTTTTCCTTTTTTTTATTATTCAGAATAATATGGAAATCAGTGGCACCCACAATGGGAGTAGCATGATGTGGTTCTTCAAGGATCGAGGGTTTGATGATAACAGCATACATGGAATTTTCAGAAAGTGCAAACGCCTAGAGAGTGTTCACAAAGAGAGAGCAAATGAGAATTGGGAATACTTGAGAYCCATTGGAATTCAAGAGAGGAAGATTCCTTCCATTGTTTCGAAATGCCCCAAGATCCTGGCCCTSGACCTCAACGAGAAGATTGTCCCCATGGTTGAGTGTCTCAGGACACTAGGAACAAAACCCCATGAAGTCACCTCTGCCATTGCCAAGTTCCCTCACATACTCTCGCACAGCGTCGAAGAGAAGCTCTGTCCCCTCTTGGCATTCTTTCAGGCATTAGGCATACCRGAGAAGCAAATTGGGAAAGTGATACTGATCAARCCTCGGCTTATCAGCTACAGCATRGAAACAAAGTTGAAAGAGATTGTGGACTTCCTTGRTAGCCTTGGTCTTGATAAAGATGGAATGATTGGAAAAGTCATAATGAAGTTCCCGTTTATAATGGGTTATAGTGTTAACAAGAGGCTCCGGCCGACTTCAGAGTTTCTGAGGTCGATAGGCCTAAGTGAGTTAGATCTTCAGGCTGTAGCTATGAACTTCCCTGCAATCTTAAGTAGAGATGCAAAAAAGGCTTTGGTGCCCAATTATGATTTCTTAAAGAAATGTGGATTTCAAGACCCACAAATATCTGCTTTGGTTGTTGGTTTTCCTCCTATCTTGATCAAGAGCATACAGAATTCTTTAGAGCCAAGGATTAGGTTTTTAGTGGACGTGATGGGGAGACAAGTCGATGAAGTCATTGATTATCCTTGCTTCTTTCGTCATGGCCTCAAAAGAAGGATCACAAATTGA 954 0.4119 MSVHQNYKCIFFFLFFIIQNNMEISGTHNGSSMMWFFKDRGFDDNSIHGIFRKCKRLESVHKERANENWEYLRXIGIQERKIPSIVSKCPKILALDLNEKIVPMVECLRTLGTKPHEVTSAIAKFPHILSHSVEEKLCPLLAFFQALGIPEKQIGKVILIKPRLISYSXETKLKEIVDFLXSLGLDKDGMIGKVIMKFPFIMGYSVNKRLRPTSEFLRSIGLSELDLQAVAMNFPAILSRDAKKALVPNYDFLKKCGFQDPQISALVVGFPPILIKSIQNSLEPRIRFLVDVMGRQVDEVIDYPCFFRHGLKRRITN* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1973 317 SMART mt_12 155 186 IPR003690 GO:0003690|GO:0006355
Amo14g1973 317 SMART mt_12 119 150 IPR003690 GO:0003690|GO:0006355
Amo14g1973 317 SMART mt_12 192 223 IPR003690 GO:0003690|GO:0006355
Amo14g1973 317 SMART mt_12 228 259 IPR003690 GO:0003690|GO:0006355
Amo14g1973 317 SMART mt_12 83 114 IPR003690 GO:0003690|GO:0006355
Amo14g1973 317 SMART mt_12 264 296 IPR003690 GO:0003690|GO:0006355
Amo14g1973 317 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 32 316 - -
Amo14g1973 317 PANTHER CGI-12 PROTEIN-RELATED 32 316 IPR003690 GO:0003690|GO:0006355
Amo14g1973 317 Pfam mTERF 36 143 IPR003690 GO:0003690|GO:0006355
Amo14g1973 317 Pfam mTERF 126 315 IPR003690 GO:0003690|GO:0006355
Amo14g1973 317 Gene3D Transcription termination factor 3, mitochondrial 116 317 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1973 Amo-Chr14 49473037 49475873 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo14g1973 mTERF 7.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1973 K15032 - gmx:100816929 493.426