Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1953 ATGGAGTCGGACGAGTACGACTTTCAGGAAGATGAAACACAACACGACCATCATGCAGAGGCCGATGACGACGCCGGAGGAATGTCTGACAATTATGCGGAAGACGAGTTTTACGCTGTTGATTCCGTGGAGTGGATAGGTTGGATTGATTTTTTGAACTTGAGCAAGGAGGATGTTCTCCGGTTTAATTTCGCAGATGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGGCGCGAGACGTTCCAGAAATGAAAAACGCGGCGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGGGTACCGATCCTCGAAGTTCTACTCGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGGTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGACGATGAATCAGGACGTTGTGTACTTTTTAGACGCGCATAA 462 0.5022 MESDEYDFQEDETQHDHHAEADDDAGGMSDNYAEDEFYAVDSVEWIGWIDFLNLSKEDVLRFNFADVDIAFEFYQQYAKHHGFGARRSRNEKRGEVRIRQEFVCHRQGYRSSKFYSMPNRQKRPRAETRCGCPARMLLRMDDESGRCVLFRRA* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1953 153 MobiDBLite consensus disorder prediction 10 25 - -
Amo14g1953 153 MobiDBLite consensus disorder prediction 1 27 - -
Amo14g1953 153 Pfam FAR1 DNA-binding domain 72 145 IPR004330 -
Amo14g1953 153 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 12 151 - -
Amo14g1953 153 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1953 Amo-Chr14 48258774 48259274 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo14g1953 FAR1 6.3e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1953 - - ahf:112770447 258.07