Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1935 ATGTCTTCTCATTCGTTCAGTAACCTCTTCCACTCTTCCACAACCACCACTACTCCAAACTCCTCAACAACTACCCTTCTTGATTCCATTGTTGCAACCCCAAAACATCAACTCACTGCTTGTATTTGCACCCATTGTAACCATCTCCTCACTTTCAATCCTGCAGGTCATGGTGTGGAGCAAGGGACAAATAATAATAATAATAATAATAATGTGCAATCTCATCATCATCAACTTCAACAAGGAACAAGGTGGAGTCCAACGCCAATTCAGTTATTGGTGCTTGAGGAGTTGTATAGGCAAGGAACCAAGACTCCGTCGGCCGAGCAAATCCAGCAGATAGCTTCTCAGCTGCGACGCTTCGGCAAGATCGAAGGCAAGAATGTCTTCTACTGGTTTCAGAATCACAAGGCCAGGGAGCGCCAGAAGCGTCGCCGCCGCGAGATGGAGGAAACTACTGCTGCTGCTTCTGCCAAAGGGTTGAAAGAGACAGGTTGTGAAGTTAAAGAGACAAAGAAGTGGGCATCCACTTCAAACTGCAATGGTGGTGGTGGACATGCAGTTCAGGAATCTATGACTGCAGTTGATATATCAGAAAAGGAGTCAAATGGTTGGAATGAATTTGAAGAGAGAGTTTTGAGGAGAAACAGATCTGAGAGACAGGCTAAGTACTTTAACATTCCCTCCATTAACATTGCAGCAACTGCTTCCGTAGCTTCACAGATAACTCATAACATTCAACTTCTAAGTACTCATCATCATCCTCAACATCACAACTACAATAATAAACAAGACAATAATTCGTCTCATCCTCGAACCCTTGAGCTTTTCCCAATTCACAAGAACCATGATGATGATGATGACATCATTTCTTTCTCGGACAGGAATTCCAACAAGCTATGTGCCAATGCGTCCATGGAAGAAGCCCTTAGCTGTGACCAGTTTTTTGAGTTTCTTCCATTAAGGAACTGA 972 0.4352 MSSHSFSNLFHSSTTTTTPNSSTTTLLDSIVATPKHQLTACICTHCNHLLTFNPAGHGVEQGTNNNNNNNNVQSHHHQLQQGTRWSPTPIQLLVLEELYRQGTKTPSAEQIQQIASQLRRFGKIEGKNVFYWFQNHKARERQKRRRREMEETTAAASAKGLKETGCEVKETKKWASTSNCNGGGGHAVQESMTAVDISEKESNGWNEFEERVLRRNRSERQAKYFNIPSINIAATASVASQITHNIQLLSTHHHPQHHNYNNKQDNNSSHPRTLELFPIHKNHDDDDDIISFSDRNSNKLCANASMEEALSCDQFFEFLPLRN* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1935 323 MobiDBLite consensus disorder prediction 251 272 - -
Amo14g1935 323 ProSiteProfiles 'Homeobox' domain profile. 78 143 IPR001356 GO:0003677
Amo14g1935 323 CDD homeodomain 83 138 IPR001356 GO:0003677
Amo14g1935 323 Pfam Homeodomain 83 142 IPR001356 GO:0003677
Amo14g1935 323 Gene3D - 82 149 - -
Amo14g1935 323 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 15 323 - -
Amo14g1935 323 MobiDBLite consensus disorder prediction 60 83 - -
Amo14g1935 323 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 15 323 IPR044555 GO:0003700|GO:0099402
Amo14g1935 323 SUPERFAMILY Homeodomain-like 78 145 IPR009057 -
Amo14g1935 323 SMART HOX_1 80 147 IPR001356 GO:0003677
Amo14g1935 323 MobiDBLite consensus disorder prediction 1 23 - -
Amo14g1935 323 Coils Coil 139 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1935 Amo-Chr14 47174368 47177388 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1935 71 181 Wox Gene Family AT3G18010 54.098 1.89e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Amo14g1935 Homeodomain 6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1935 - - adu:107484154 580.096