Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1885 ATGGGGATGAGGAGCAATAGTAATAAAGGAGGAGAAATTATTCAAGTTGAAGGGGGCCACATTGTGAGGTCCACAGGGAGAAAAGACCGCCACAGCAAGGTCTACACCGCCAAAGGACCACGCGATAGAAGGGTCAGGCTATCCGCCCACACCGCCATCGAATTCTACGACGTTCAGGACCGTCTCGGCTACGACCGCCCCAGCAAAGCCCAATTCCTTCAGATTCAGCAACAGCAGCAACAAAACCTTGAAACTGACCCCATAGCTTTCTTCCCTACAAGCTCAGCTACTCCCTCTATGAATTTCCAAAACTACCCTCACCAGATGATTTCAAGAACCGCCAACAACAACGTTAACCCCATTACGGAAGATCTTGGACTTTCACTCCACCCGTTTCAACAAGCACCTTCGAATCAACATCAAGGTACTCTCTTTGGTGCTGGATCCAGTAACAACGTCGGATTTGAGAGCCAGTATCAGAAGATTGTAGCTTGGAACAACGAAGCTGCTACCATGGATATCAACAGGGTAGGGTTCATGGTGAACCCGCAGCAGAATCATCATCATCCATTTCTAGGCCAAAGTGTGAGTGGGTCCCTTCAGTCAAGTTTTCCACCACCATCACTTAGATCTTGGGGTGAAATTCAGATGAACCCAAACTCCTCGGAACAACAACACAGCAGGCCACAACAACTGATTCACCATGCTTCCATATTTGGAAGCAGGTTTGTTTCTGATGGATTAGCAGCAGGGTTTTGCATTCCAGCTAGAATTCAAGGCGACCAAGAGAACCATCATGGAGTTGCTTCTAACACCACTCCATCTTCTGCTTCTCCTCATTCTCACCACTGA 852 0.48 MGMRSNSNKGGEIIQVEGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAQFLQIQQQQQQNLETDPIAFFPTSSATPSMNFQNYPHQMISRTANNNVNPITEDLGLSLHPFQQAPSNQHQGTLFGAGSSNNVGFESQYQKIVAWNNEAATMDINRVGFMVNPQQNHHHPFLGQSVSGSLQSSFPPPSLRSWGEIQMNPNSSEQQHSRPQQLIHHASIFGSRFVSDGLAAGFCIPARIQGDQENHHGVASNTTPSSASPHSHH* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1885 283 PANTHER TRANSCRIPTION FACTOR TCP4 83 283 - -
Amo14g1885 283 Pfam TCP family transcription factor 26 70 IPR017887 -
Amo14g1885 283 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 83 283 IPR005333 GO:0003700
Amo14g1885 283 PANTHER TRANSCRIPTION FACTOR TCP4 8 70 - -
Amo14g1885 283 MobiDBLite consensus disorder prediction 190 231 - -
Amo14g1885 283 MobiDBLite consensus disorder prediction 264 283 - -
Amo14g1885 283 MobiDBLite consensus disorder prediction 1 32 - -
Amo14g1885 283 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 70 IPR005333 GO:0003700
Amo14g1885 283 ProSiteProfiles TCP domain profile. 27 85 IPR017887 -
Amo14g1885 283 MobiDBLite consensus disorder prediction 263 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1885 Amo-Chr14 44136622 44137635 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1885 1 172 TCP Transcription Factor Family AT2G31070 41.228 1.21e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Amo14g1885 TCP 3.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1885 - - gmx:100782826 206.453