Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1882 ATGCTGCAATTATTGGTGCTCTGTGCAGGGACCGTAGGAAACAAGTGTACTTGGGTGAGAAAATGCAGTGATGATTGTGAATTTGACACAACACATGCTGCAGCTAGGGCATATGATCGAGCTGCGATCAAGTTCCGTGGCATTGATGCAGATATTAATTTCAACGTCAGCGATTATCATGAAGATATAAATTTTAAGCAAATGAGTAACTTTACAAAGGAAGAGTTTGTGCATATTCTGCCTCCAAATACAGGGGAGTTACCCTGCACAAATGTGGTAGATGGGAATCACGCATGGGGCAGTTTCTCGGGAAAAAGTGAGAAACATTTGAATTTTGATATAGCAATCATCGTTGGAATTGAAATGCAGAGAAAAGCAGCATTGCCGTTGAGGGACGCAAAAAGCGGCAATGCGAACAAGATGAGGGCTCTGTGCAGCAAGGAAGCTTTGGTGAAGCTTCTGTGA 465 0.4301 MLQLLVLCAGTVGNKCTWVRKCSDDCEFDTTHAAARAYDRAAIKFRGIDADINFNVSDYHEDINFKQMSNFTKEEFVHILPPNTGELPCTNVVDGNHAWGSFSGKSEKHLNFDIAIIVGIEMQRKAALPLRDAKSGNANKMRALCSKEALVKLL* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1882 154 SMART rav1_2 10 61 IPR001471 GO:0003700|GO:0006355
Amo14g1882 154 SUPERFAMILY DNA-binding domain 28 57 IPR016177 GO:0003677
Amo14g1882 154 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 27 80 - -
Amo14g1882 154 ProSiteProfiles AP2/ERF domain profile. 28 55 IPR001471 GO:0003700|GO:0006355
Amo14g1882 154 Gene3D AP2/ERF domain 26 57 IPR036955 GO:0003700|GO:0006355
Amo14g1882 154 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 27 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1882 Amo-Chr14 44032559 44033600 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1882 28 87 AP2-EREBP Transcription Factor Family AT2G39250 58.333 3.89e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1882 K09284 - aip:107625266 124.405