Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1876 ATGAAGCTCTCCTTTTCGATACCCTCGAAGTCCTCTTCCTCCTCCAAACCCATCAAACTCGACGACTCCTCCAAAAACGGCGCGGCACCCTCCAAGCACTTCGTCACCGAATTCGACCCTTCCAAACCGCCAATCGAACAAACCGCCACCGTTATACCCCCGATCCAGAACGAATGGCGCCCCACCAAGAAGATGAAGAACCTCGAGCTTCCCATCACTGACCCCAACGCTGACCATCAATCCCTCGAATTCGAGAACGATTCCAATGCCGCGGATGCAGAACTCGGCACCGACATGTCCTACGGTCTCAACCTGCGCCAAGCCGCGGAGAAAAATGGCAAAACCGGTGAACTCGCTGATGATGAGGATGATAGGGTTCCGCGTCAACGGCCGGAGGTGGCGTTGCTGCAGAAGTTTAAGGACGACTTGAAGCGGCTGCCTGATCACCAGGGGCTCGAGGAGTTCAATGATGTCCCTGTTGAGGGTTTCGGCAAGGCCTTGCTTGCCGGATATGGGTGGTCAGAAGGAATGGGAATAGGGAGGAATGCCAAGGAGGACGTTAAGGTTGTGGAGTACAAGAGGAGGACTGCCAAGGAAGGGTTAGGATTTGTTGGCGATGATCGCAGTTCTGTTCGGAGCCAGAAGAAGAAAAGCAGGGAAGACAATGGGAGAAATGATGCAGGTTTTGTTAGTGAGAAGAAGATTGTGAGGATTATTGGGGGAAAAGATGCTGGATTGAAGGGTATTGTTGTGAGGAGAATTGGGGAGGATTGGATTGTTTTGAAGGTTTCAAGGAGTGGGGAAGAAGTGGAGGCTAGAGTGAGTGTGGATGATGTTGCTGAACTGGGATCTGCTGAGGAAGAGAGGTGCTTGAGGAAATTGAAGGAGCTGAGGATTCGGCACAAGGGTGAAGATGACAAGGCTTCAAGGCATAAGCGTGAGAGAGAGCGAGGCGGGGTTGAGAAGACAACTCGAGCGGAAGCTAATGGGGGTGATCAGCAGCGGGGAAGGAAACAGGTTTCTTGGCTCACAAGTCACATTCGAGTTAGGGTTATTAGCCAGAACATTAAAGGAGGGCGGTTGTATTTGAAAAAGGCACAGGTTTTGGATGTTGTTGGGCCTTTGACTTGTGATATATCTATGGATGAGAGCAAGGAGATTGTTCAAGGAGTGTCCCAAGATATGCTGGAGACCGCGCTTCCTCGACGTGGGGGACCAGTTCTTGTGCTATCTGGTAAGTATAAGGGCGCCTTTGGGAGCCTGGTTGAGAGGGATTTGGATCGGGAAGTTGGTGTTGTTCGGGATGCTGATACTCATCAGCTGCTAAATGTGAAGCTTGAACAGATTGCAGAGTATATAGGGGATCCTAGCTTATTAGGGCATTGA 1386 0.5101 MKLSFSIPSKSSSSSKPIKLDDSSKNGAAPSKHFVTEFDPSKPPIEQTATVIPPIQNEWRPTKKMKNLELPITDPNADHQSLEFENDSNAADAELGTDMSYGLNLRQAAEKNGKTGELADDEDDRVPRQRPEVALLQKFKDDLKRLPDHQGLEEFNDVPVEGFGKALLAGYGWSEGMGIGRNAKEDVKVVEYKRRTAKEGLGFVGDDRSSVRSQKKKSREDNGRNDAGFVSEKKIVRIIGGKDAGLKGIVVRRIGEDWIVLKVSRSGEEVEARVSVDDVAELGSAEEERCLRKLKELRIRHKGEDDKASRHKRERERGGVEKTTRAEANGGDQQRGRKQVSWLTSHIRVRVISQNIKGGRLYLKKAQVLDVVGPLTCDISMDESKEIVQGVSQDMLETALPRRGGPVLVLSGKYKGAFGSLVERDLDREVGVVRDADTHQLLNVKLEQIAEYIGDPSLLGH* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1876 461 MobiDBLite consensus disorder prediction 109 128 - -
Amo14g1876 461 PANTHER G PATCH AND KOW-CONTAINING 1 459 IPR045166 GO:0000398
Amo14g1876 461 MobiDBLite consensus disorder prediction 302 338 - -
Amo14g1876 461 Gene3D - 346 400 - -
Amo14g1876 461 SMART G-patch_5 158 204 IPR000467 GO:0003676
Amo14g1876 461 MobiDBLite consensus disorder prediction 1 60 - -
Amo14g1876 461 MobiDBLite consensus disorder prediction 113 128 - -
Amo14g1876 461 MobiDBLite consensus disorder prediction 302 323 - -
Amo14g1876 461 Pfam G-patch domain 147 204 IPR026822 -
Amo14g1876 461 ProSiteProfiles G-patch domain profile. 160 206 IPR000467 GO:0003676
Amo14g1876 461 MobiDBLite consensus disorder prediction 1 21 - -
Amo14g1876 461 MobiDBLite consensus disorder prediction 209 226 - -
Amo14g1876 461 MobiDBLite consensus disorder prediction 203 226 - -
Amo14g1876 461 SMART kow_9 400 427 IPR005824 -
Amo14g1876 461 SMART kow_9 229 256 IPR005824 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1876 Amo-Chr14 43721579 43725032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1876 342 434 C2H2 Transcription Factor Family AT1G55460 32.258 3.22e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1876 K13101 - gmx:100784983 496.508