Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1845 ATGTGCCTGCCTCCACCGAGAGTGAGGCAAGATGCAATACAGGCGATGGTGAATTCAAGATGTGGACCCTGTGGGGGTGATATCGTTGGAAATTTTGAAATGAATGTCAGCAATGTTATGACAACAGTGACTGGCCGTGTACTTGGACCCCCAAAACTGAAGCTTAGCGATCCAAGTGGCAGGACTATCCATATGGCATTGACTCCAGAGAAGTGCCAATGGAATTTAGTTGAGAAGTCAATGGTTGAAGGTAAGCCAGTTGAGTGTTGGGGCATTCTTGATTTCACCCTCCGCAGTAGATGTGTCTTTTTCGATAATAGATTCATTTCTAAGCTTATTGAGAAGTACAATAAATTTGGCATCATCATGAAGGAGCCAGTTTGGATAGAAAAAACAGACATGTTGAAACTTGGAAACTATAATCAGCTTTCTGACTTACTTGAAAAGATTAATGATGCGGTTTCCAGAAAATATAGATGCCGGCTGCAATTTCTTCTTTGTGTAATGGCCTCCAAAGATCCAGGTTACAAGTGCCTCAAGTGGATTGCTGAGACCAAGGTCGGCATTGTGACACAGTGCTGCTTGTCGGGTAATGCTAATTCTGCAAAAGATCAATATCTTACTAATCTTGCTCTCAAGATCAATGCGAAAATTGGAGGCAGCAATGTGGAGCTTATTAATAGGCTTCCTCACTTTGAGGGCGATGGTCATGTTATGTTTATCGGGGCTGATGTAAATCATCCGGCTTCCAGGGATGCAAATAGTCCATCAATGGCTGCTGTGGTTGCCACTGTTAATTGGCCGGCTGCAAACCGCTATGCTGCTCGAGTTTGTGCTCAAGAGCATCGCACTGAGAAGATTTTGAACTTTGGAGAAGTTTGCCTTGAGCTTGTTTCATGTTATGAAAGGCTGAATGGAGCCAAGCCTGAAAAGATTGTTATCTTCCGTGATGGGGTCAGTGAAAGTCAATTTCAGATGGTTCTTGGTGAAGAGCTTCAGGATTTGAAGAGGACCTTCGAACGTGCAAATTATTCCCCAACCATCACTCTTATTGTGGCACAAAAGCGACACCAGACTCGACTCTTCCCTTCTCCTGCTGAGAATGAGATGACATCTGCTACTCGCGGCAATGTGTTGCCTGGAACAGTGGTGGATACAGTAATCATCCACCCCTTTGAGTTTGACTTTTATCTGGTTAGTCACCATGGAAGCCTGGGAACAAGCAAGCCCACTCATTACCATGTCTTGTGGGATGAGCACGATTTCACATCAGATAAACTCCAGGAACTGATATATGACATGTGCTTTACATTTGCGCGGTGCACGAAACCTGTGTCTTTAGTCCCTCCGGTGTACTATGCTGACCTTGCTGCATACAGAGGACGACAATACTATGAAGCAAAGATTGGGATGCAATCTCCGTATTCAGCTACATCTTCCTCATCATCACCTTTGGCTTCTTCATCCGTTTCTTCAGCTACTTCAAATTCGAATGATATGGATTTCTACAAACTGCATTCTGATCTGGAAAATATAATGTTCTTCATCTAA 1551 0.4371 MCLPPPRVRQDAIQAMVNSRCGPCGGDIVGNFEMNVSNVMTTVTGRVLGPPKLKLSDPSGRTIHMALTPEKCQWNLVEKSMVEGKPVECWGILDFTLRSRCVFFDNRFISKLIEKYNKFGIIMKEPVWIEKTDMLKLGNYNQLSDLLEKINDAVSRKYRCRLQFLLCVMASKDPGYKCLKWIAETKVGIVTQCCLSGNANSAKDQYLTNLALKINAKIGGSNVELINRLPHFEGDGHVMFIGADVNHPASRDANSPSMAAVVATVNWPAANRYAARVCAQEHRTEKILNFGEVCLELVSCYERLNGAKPEKIVIFRDGVSESQFQMVLGEELQDLKRTFERANYSPTITLIVAQKRHQTRLFPSPAENEMTSATRGNVLPGTVVDTVIIHPFEFDFYLVSHHGSLGTSKPTHYHVLWDEHDFTSDKLQELIYDMCFTFARCTKPVSLVPPVYYADLAAYRGRQYYEAKIGMQSPYSATSSSSSPLASSSVSSATSNSNDMDFYKLHSDLENIMFFI* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1845 516 Gene3D - 234 516 IPR036397 GO:0003676
Amo14g1845 516 ProSiteProfiles Piwi domain profile. 164 466 IPR003165 GO:0003676
Amo14g1845 516 SUPERFAMILY Ribonuclease H-like 148 466 IPR012337 -
Amo14g1845 516 CDD Piwi_ago-like 28 465 IPR045246 -
Amo14g1845 516 Pfam Piwi domain 165 465 IPR003165 GO:0003676
Amo14g1845 516 Gene3D - 47 226 - -
Amo14g1845 516 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 515 - -
Amo14g1845 516 SMART Piwi_a_2 164 466 IPR003165 GO:0003676
Amo14g1845 516 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 1 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1845 Amo-Chr14 41041242 41043633 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1845 32 515 Eukaryotic Initiation Factors Gene Family AT1G48410 38.189 1.55e-99 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1845 K11593 - gmx:100805250 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1845 14 41041242 41043633 Amo14g1845 14 41041242 41043633 ECH