Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1844 ATGGACAGAGGCGGTTACAATCAGAGACGTGGTGGTGGTAACGCCAGAGGCGACGGAGGAGGAGGCCGCATGAGAGGAAGAGCAAGAGGAAGAAACTTTTCCCAACCCCGACGGCAACCGGCTGACAGTGGCGGAGGAAGAGGCACCGCCGGCAGAGGATTTTATCCGCAACCACCACCACCACAGTGGCAGCCAAGGCAGCAGAACACCATCTCCGGGGGCACATCAACCGCAACCGGCAGCGGAACCGCACCTCCAAGTCTCGTTTCCCCTCCGTCAAACCCTCATCCTCCCTCTCAAAAAGTTGTTCCGGTTGCCGGAATGGGAACGATTGGAACGTCTTCAGACTCCAATGAAACGATCTCACCAATTCAGAGGCCCGACGCCGGTGGCAAGCTGGCGGTTAAGACCAAGACTCTTCAGGTGAACCATTTTTCAGTGAAATTCAACCCGAAGAGCAGGATCATACACTATAATGTCGATGTGAGTCCCCAATCGCCGCCACAACCAGGCCGTCCACCGAGGAGGATATCAAAGACCGAACTGTCATTGATCCGTGACAAGTTGTTCCTTGACCGTCCGGAGCTGCCGCTAGGGATGACTGCCTACGATGGTGAGAAGAACATTTTTAGCATGGTTAGTTTGCCCGAAGAGGCTTTTGTGGTGGAAGTGTCCAAGGGAGAGGACGAGAGGCCCACAGGATTCATCGTGACGTTGACTCTAGTCAACATTCTTGAGATGAGTAGGTTGGAGGATTACATCAGAGGCAGGGCATTGTCAATCCCCAGAGTGATCTTGCAGGGTGTGGATGTGGTCTTCAAGGAGAATCCAACAAAATGTACTGTTCCGGTTGGTCGCTGCTTCTACCCAATGAACCCGAAATTTAGAGAGACGAATCTTCAGCCTGGTGTGATTGCTGTTGGAGGGTTTCAGCATAGTCTCAAACCAACCCGTCAAGGACTGTCATTGTGCTTGGATTATTCGGTTTTGTCTTTCAAGAAACAAATGTCAGTGCTGGATTTCCTTCATGAACAGATTACCGGTTTCAATTTGCGCGAATTCGGAAGGTATAGAAAACATGTTGAAAATGTGCTAATTGGTTTGAAGGTTCATGTCACCCACCGGAGGACCAAACAGAAGTACACAGTTGCTCGATTAACTGGCAAGGACACACGACAAATCAATTTCCCTGCCGTGGATGCACAGGGGAACCCCACTGGGCAGCTTAGCCTTGTTGGCTACTTCCACGATAGGTATCAGATTGATATCAGGTACAAGGACATCCCTGCATTGGATTTTGGAGGTAACAAGACCAACTATGTGCCAATGGAACTTTGTGTCTTGGTTGAGGGTCAGAGGTATCCCAAAGAGTATTTGAGTAGGATGCTGCGAAAAATTTGA 1401 0.5032 MDRGGYNQRRGGGNARGDGGGGRMRGRARGRNFSQPRRQPADSGGGRGTAGRGFYPQPPPPQWQPRQQNTISGGTSTATGSGTAPPSLVSPPSNPHPPSQKVVPVAGMGTIGTSSDSNETISPIQRPDAGGKLAVKTKTLQVNHFSVKFNPKSRIIHYNVDVSPQSPPQPGRPPRRISKTELSLIRDKLFLDRPELPLGMTAYDGEKNIFSMVSLPEEAFVVEVSKGEDERPTGFIVTLTLVNILEMSRLEDYIRGRALSIPRVILQGVDVVFKENPTKCTVPVGRCFYPMNPKFRETNLQPGVIAVGGFQHSLKPTRQGLSLCLDYSVLSFKKQMSVLDFLHEQITGFNLREFGRYRKHVENVLIGLKVHVTHRRTKQKYTVARLTGKDTRQINFPAVDAQGNPTGQLSLVGYFHDRYQIDIRYKDIPALDFGGNKTNYVPMELCVLVEGQRYPKEYLSRMLRKI* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1844 466 CDD PAZ_argonaute_like 336 449 - -
Amo14g1844 466 Pfam N-terminal domain of argonaute 139 272 IPR032474 -
Amo14g1844 466 SMART DUF1785_2 282 335 IPR014811 -
Amo14g1844 466 MobiDBLite consensus disorder prediction 1 129 - -
Amo14g1844 466 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 109 460 - -
Amo14g1844 466 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 109 460 - -
Amo14g1844 466 SUPERFAMILY PAZ domain 332 462 IPR036085 GO:0005515
Amo14g1844 466 Pfam PAZ domain 353 461 IPR003100 GO:0005515
Amo14g1844 466 MobiDBLite consensus disorder prediction 66 87 - -
Amo14g1844 466 SMART PAZ_2_a_3 336 465 IPR003100 GO:0005515
Amo14g1844 466 ProSiteProfiles PAZ domain profile. 336 450 IPR003100 GO:0005515
Amo14g1844 466 Pfam Argonaute linker 1 domain 283 332 IPR014811 -
Amo14g1844 466 MobiDBLite consensus disorder prediction 110 124 - -
Amo14g1844 466 Gene3D paz domain 331 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1844 Amo-Chr14 41039756 41041236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1844 136 466 Eukaryotic Initiation Factors Gene Family AT1G48410 31.988 1.81e-37 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1844 K11593 - gmx:100805250 451.825