Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1824 ATGGAGTTCGAGGTGAAGCTTGTTGCCGCCATCGACAATTGCTTCGTCTCCCTTCCCCTCCCTCTCATCCAAACTCTCCAATCCACGCGCTCCTCTCCTCTCCCTCACATACTCGCCCTCGAGCTTCGTTCTCCCACCCACCCTCCCAACCTCTGGTTCGTCGCTTGGTCCGGCGCCACTTCTTCTTCTCCCCTGCCGTCATCGGAGGTTTCGAAACAATTTGCGGAGTGCATTTCGTTGCCGAATCACGGTACTGTTCAGGTGAGAGCTGCTTCCAATGTGGCTCATGCTTCTCTTGTTACGATAGAGCCTCACACCGAGGATGATTGGGAGGAATTTTGCGACTATTCCGAACAAGCTGAGGCTGCCCTAATCCTCAACCGTAGTTTTTTTGTCAGGATTGTTCATGAAGGGATGAGATTTCCTTTGTGGTTGCATGGTCACACCGTCATCACATTCCATGTCACTTCTGTTTTCCCGAAGAAAGCGGTGGTACAACTCATGCCAGGAACTGAAGTTGCCGTTGCTCCCAAAAGGCGCAATAGATTGTTGGATTCAGCAGGAGATTCACATCTAGAATCCTGTGATAAGGAACAAACTGCAAAGATGCTTCTCCGTATACAAGATCCAGGGGTATTATGTCATACCAGAACTGATGTCAAAGGTGTTGAGCTCCATATGGGGCTCACTTCTGTYGCTTTTGTTCACCCAGAAACAGCCAAGCACTTCTCTTTTAACATGCTTCAGCCAGTTTCCTTAGTACCAAGAATATCCAAGGAGAATGCCAATATTTCGAAAACCAATGTTTTGAAATCCAAAGGCGGGTCAMCTGGCAATGAAGTTGAGAATGGAAATTTAACTGACAAGAAACAACATCGACAAGCTGTTGTTCATCTCTTATTTTCAGAATCTGTGGCTGCAGGGCATGTGATGTTAGCCAAGTCTCTTCGCCTCTATTTGAGAGCTGGCCTACATACATGGGTTTATTTGAAAGCATATGATATCATTAGGGAGAAAAGTATTCCATCCATCACTTTTTCTCCTTGTCAATTCAAACTATTAAAGCAGGATAGTTCTGCTGAGAAAGATGGTCTGGATGGCCACAATAATCACATGAATGGAAAATTACTTGCGAAATCTATGTCAGGTGACTTTGTGGACCCTATAGATTGGTCAATTAACAATGAAGTTGTTGCAGCTCTTTCTGATGAATCCAACTGCAAAGCAGAGGAAGAGAATGCAAATCAGTCTCAGAATCAAAAGGGGATAAAGAGTCTTGTTCGGCTGTGGTATATTGCACAACTTGAGGCAATTACTTCTATTACGGGTGTAGAGGTTAATTCATTGGTCATGTGTAGCCAAACTTTGCTTGATTTCAAATTAAACTGTTATAACCTTGGGGATAATGGGAGAGCTCCCCTACCTTATAATTCTTCAGAGAATAGTGGCAAGACAGCTGAAGTGTTATTTATTTTGACTTTTGGGGATGAACATCTGCATCATGGGAAACCAAATGCATACAAAGTTGCTCTCGGTAAAAGCCTTAAAAGTATCAATATAGGCGATCTTCAGCTTTTTGAAGGGATGAAATTGGGTGATCCCGTGTCTATTCATTCTATCGAAGAGACAGCATCTCAAGAGCACATTAGTTCAAATGTATCTTTACTTAGCTGGATGGAGAAACCAGCTTCTGATATTATTAATCGGATRTTGGTATTGTTATCTTTGAAGTGTGGTCTGTGGTTTGGTTCATGCAACTTGCCACTCCCTGGACATGTTTTAGTRCACGGACCACCAGGCTCTGGGAAAACTTCATTATCAAGGGCTGTAGCCAAATCCCTTGAGAATCATAAAGATATCTTAGCACACATAGTTTTTGTGCCCTGCTCAAAACTTTCTTTGGAGAAGGTCCCAATAATTCGCCAAGAACTTACAAACCATGTAATGGAAGCTTTAAACCATGCGCCCTCCATCGTAATCTTTGATGATCTTGATAGCATAATTTCAACTTCTGATTCTGAAGGATCTCAGCCCTCAACGTCTGTTGCTGGACTCTCAGATATTTTGGTTAACATCATCGATGAATATAGGGAGAAGAGGCAAAAATCATGTGGATTTGGACCGGTAGCCTTCATAGCTTCCATACAGTCACTGGAGAAACTGCCACAGTCTTTGAGCTCTTCAGGACGCTTTGACTTCCACATACAGTTGCCAGCTCCTGCAGCTTCAGAGCGTAAAGCTATGTTGAAGCATGAAATTGAAAGGCGTCACTTGCAATGTGGTGAAGACATCCTACTGGATGTGGCTGTCAAATGTGATGGTTATGATGGCTATGATCTGGAAATATTAGTTGACAGAGCTGTCCATGCTGCTGTTCATCGATTTTTGCCATCAAATGCTGCCAATAATGAGCACGAGAGTCCTGCTTTACTAAGAGAGGATTTCTCCCAGGCAATGCATGGTTTTCTTCCAGTTGCAATGCGTGACATCACAAAATCTGCATCTGATGATGGTCGTTCTGGATGGGATGATGTGGGTGGCCTCGTTGACATCCGAAATGCTATTAAGGAGATGATAGAGTTGCCATCAAAGTTTCCAAAAACTTTTGCGCAAGCACCATTGAGGTTGAGGTCAAACGTCCTTTTATATGGTCCTCCTGGTTGTGGCAAAACTCACATTGTGGGTGCTGCTGCGGCTGCTTCATCGCTTCGATTCATATCAGTGAAAGGACCAGAGCTGTTGAACAAGTATATTGGTGCTTCTGAACAAGCCGTTAGGGATATATTCTCTAAAGCAGCAGCAGCAGCTCCTTGCTTACTATTTTTTGATGAGTTTGATTCTATTGCTCCTAAGAGAGGGCATGACAATACTGGAGTAACTGATCGTGTCGTTAATCAATTTCTGACCGAGTTAGATGGTGTTGAGATTTTAACTGGTGTATTTGTATTTGCTGCTACAAGTAGACCGGATTTACTTGATGCGGCACTGCTGAGACCTGGTAGGTTAGATCGACTTCTTTTCTGTGATTTTCCATCTTGGCATGAGAGATTGGAAATTCTGACTGTTCTTTCTAGAAAGCCTTAG 3084 0.4332 MEFEVKLVAAIDNCFVSLPLPLIQTLQSTRSSPLPHILALELRSPTHPPNLWFVAWSGATSSSPLPSSEVSKQFAECISLPNHGTVQVRAASNVAHASLVTIEPHTEDDWEEFCDYSEQAEAALILNRSFFVRIVHEGMRFPLWLHGHTVITFHVTSVFPKKAVVQLMPGTEVAVAPKRRNRLLDSAGDSHLESCDKEQTAKMLLRIQDPGVLCHTRTDVKGVELHMGLTSVAFVHPETAKHFSFNMLQPVSLVPRISKENANISKTNVLKSKGGSXGNEVENGNLTDKKQHRQAVVHLLFSESVAAGHVMLAKSLRLYLRAGLHTWVYLKAYDIIREKSIPSITFSPCQFKLLKQDSSAEKDGLDGHNNHMNGKLLAKSMSGDFVDPIDWSINNEVVAALSDESNCKAEEENANQSQNQKGIKSLVRLWYIAQLEAITSITGVEVNSLVMCSQTLLDFKLNCYNLGDNGRAPLPYNSSENSGKTAEVLFILTFGDEHLHHGKPNAYKVALGKSLKSINIGDLQLFEGMKLGDPVSIHSIEETASQEHISSNVSLLSWMEKPASDIINRXLVLLSLKCGLWFGSCNLPLPGHVLVHGPPGSGKTSLSRAVAKSLENHKDILAHIVFVPCSKLSLEKVPIIRQELTNHVMEALNHAPSIVIFDDLDSIISTSDSEGSQPSTSVAGLSDILVNIIDEYREKRQKSCGFGPVAFIASIQSLEKLPQSLSSSGRFDFHIQLPAPAASERKAMLKHEIERRHLQCGEDILLDVAVKCDGYDGYDLEILVDRAVHAAVHRFLPSNAANNEHESPALLREDFSQAMHGFLPVAMRDITKSASDDGRSGWDDVGGLVDIRNAIKEMIELPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWHERLEILTVLSRKP* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1824 1027 PANTHER - 3 1025 - -
Amo14g1824 1027 Gene3D - 94 178 - -
Amo14g1824 1027 CDD AAA 846 1009 - -
Amo14g1824 1027 Gene3D - 841 1010 IPR027417 -
Amo14g1824 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 842 1024 IPR027417 -
Amo14g1824 1027 CDD AAA 587 738 - -
Amo14g1824 1027 SMART AAA_5 589 741 IPR003593 -
Amo14g1824 1027 SMART AAA_5 876 1012 IPR003593 -
Amo14g1824 1027 SUPERFAMILY Cdc48 domain 2-like 96 177 IPR029067 -
Amo14g1824 1027 Gene3D - 1011 1026 - -
Amo14g1824 1027 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 573 819 IPR027417 -
Amo14g1824 1027 ProSitePatterns AAA-protein family signature. 980 998 IPR003960 GO:0005524|GO:0016887
Amo14g1824 1027 PANTHER AAA-FAMILY ATPASE 3 1025 - -
Amo14g1824 1027 Pfam Peroxisome biogenesis factor 1, N-terminal 100 177 IPR015342 GO:0005524|GO:0005777|GO:0007031
Amo14g1824 1027 Pfam ATPase family associated with various cellular activities (AAA) 593 738 IPR003959 GO:0005524|GO:0016887
Amo14g1824 1027 Pfam ATPase family associated with various cellular activities (AAA) 880 1007 IPR003959 GO:0005524|GO:0016887
Amo14g1824 1027 Gene3D - 546 740 IPR027417 -
Amo14g1824 1027 Gene3D - 741 830 - -
Amo14g1824 1027 SUPERFAMILY ADC-like 10 90 IPR009010 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1824 Amo-Chr14 39669194 39677203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1824 593 803 Calmodulin-binding Proteins AT3G56690 26.887 9.17e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1824 K13338 - gmx:100803882 1585.08