Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1822 TTGAGTAGGAGATATGAATGGTTTTTCATATTAGAGCGCGAAGAGACAAGTAACTATTTTACACCATCTCCTCCAGGTGCGCGATACTTAACCTCGAATCTTGTTTGGCATGTAGATCCTTCTCCTGCACCTCACAAAATGAGTACGTCAAACTCAAAAGTGAACTTCATTGCAAGTAGTTCTGGAGTTGTAATAGAAAACATAGCTCCATTGAAAACCGTGTCCGGTCCTACAACAAATTTACCGGGGGATGAAGACATTCAACCACTTTCAGGATGCCCATTCTATCATCCGGTTTCAAACGAATTAGCACTTCCTTCAGCTGTAGTCCCAGCTATTCTCAAGTATGGAAGCAAGAGCTGGGACATACAGTATTGCGGACTAGGCAAAAGTTACAACAAGTTCTTTAACCACAGAGGCTGGAAAAAATTTGCTGTTGATAATCATTTGGAGGTTGGGGACGCTTGCGTCTTTGAACTCAAGGAGTCGAGTGAAGAGAAACTTGTCTTCCAAGTTCAAATTCTTAGAGGTGACCTCCCTGAAACTTTTCTTAAAAGGAAAGAAAAAGAGAAGGAAAAGAAAAAGGCCAGGGCCAAGATTGCAGAAAAGCCAGGAGGTAAAAGTGCAGAAAACCGCAACAGTGCAGAAATGCCAATTCTCATTGACTAG 669 0.42 LSRRYEWFFILEREETSNYFTPSPPGARYLTSNLVWHVDPSPAPHKMSTSNSKVNFIASSSGVVIENIAPLKTVSGPTTNLPGDEDIQPLSGCPFYHPVSNELALPSAVVPAILKYGSKSWDIQYCGLGKSYNKFFNHRGWKKFAVDNHLEVGDACVFELKESSEEKLVFQVQILRGDLPETFLKRKEKEKEKKKARAKIAEKPGGKSAENRNSAEMPILID* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1822 222 MobiDBLite consensus disorder prediction 186 222 - -
Amo14g1822 222 MobiDBLite consensus disorder prediction 186 206 - -
Amo14g1822 222 Gene3D - 99 178 IPR015300 -
Amo14g1822 222 SUPERFAMILY DNA-binding pseudobarrel domain 116 176 IPR015300 -
Amo14g1822 222 Pfam B3 DNA binding domain 117 172 IPR003340 GO:0003677
Amo14g1822 222 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS04G0386900 103 190 - -
Amo14g1822 222 SMART B3_2 95 178 IPR003340 GO:0003677
Amo14g1822 222 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 103 190 IPR044837 -
Amo14g1822 222 CDD B3_DNA 119 176 IPR003340 GO:0003677
Amo14g1822 222 ProSiteProfiles B3 DNA-binding domain profile. 118 178 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1822 Amo-Chr14 39555394 39558497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1822 94 181 REM Transcription Factor Family AT4G33280 32.955 6.91e-06 44.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Amo14g1822 B3 6.1e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1822 - - adu:107484003 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1822 14 39555394 39558497 Amo04g0726 04 22590780 22593405 hybridization