Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1797 ATGCATCTGATAATGAATCGACAAAATACAGACAACCTAGTAGAGAATCTATTGGATTTTGAGTATGAACTTAAGAAGCCATACCTATTATATCGGAATGCGGCTCAAGAAGTTAATGGTATATGGTTTTACAATGAAGATGAATGTGAAGAAGTTGCAAATCTCTTTAATAGTATGGGTATAGAAAAAGAAGCTGAGGCTAAAATACAAGGGGCATCGCAGAAACAGAAAACCAAACAATCATCAATCTTCAACCCTTTTGCAGAGAGGAAGAGGGTTAGGACTGTGGAGTGTGTCACTGCTCATTCTAGCTCTCCTGAACGATGCAATACCTCTAAACTAGAGCACAATTTGAAGTCAATTTCAATGTTGGAGCAAGAAACAAAGATGTTGGAGCAAGTTCCCGGGATGAAACTCACACAAGAGATCAAGAAACTAAGACAGGCTTGTTTTAAAGTTAATTACAAAAGGAGGAAATTTTTGGCCTCCAAATCTTATTCATCATCACTTAGCTAA 516 0.3721 MHLIMNRQNTDNLVENLLDFEYELKKPYLLYRNAAQEVNGIWFYNEDECEEVANLFNSMGIEKEAEAKIQGASQKQKTKQSSIFNPFAERKRVRTVECVTAHSSSPERCNTSKLEHNLKSISMLEQETKMLEQVPGMKLTQEIKKLRQACFKVNYKRRKFLASKSYSSSLS* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1797 171 SUPERFAMILY PH domain-like 3 58 - -
Amo14g1797 171 PANTHER TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 4 113 IPR010334 GO:0000290|GO:0008047|GO:0043085
Amo14g1797 171 Gene3D - 1 62 IPR011993 -
Amo14g1797 171 Pfam Dcp1-like decapping family 3 57 IPR010334 GO:0000290|GO:0008047|GO:0043085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1797 Amo-Chr14 37635510 37638550 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1797 117 166 AtRKD Transcription Factor Family AT5G53040 48.214 7.22e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1797 K12611 - aip:107639160 123.25