Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo14g1789 | ATGTATAGTTTTGCAGATGCGTTTGGTGAGAATGGAAGACCAGCATCAGGTGATGAAGGTGCTATACCTCCGAATGCTTCGCTCCAAATTGATCTTGAGTTGATATCTTGGAAGGCTGTATCTGACATAACCAAGGATAATAAGGTTCTCAAGAAGACCTTGAAGGAGGGAGAGGGGTATGAACGTCCCAATGATGGAGCTGCGGTTCAAGTGAAACTTATTGGTAAGCTGCAAGATGGGACTGTTTTCGTGAAGAAGGGTCATGATGATGAGCATCCATTTGAGTTCAAAATTGACGAGGAGCAAGTAATTAATGGACTTGATAAAGCTGTGATGAACATGAAGAAAGGGGAAGTTGCATTGGTGACCATACATCCTGAGTATGCTTTTGGCTCATCTGGGTCAACTCAGGAATTGGCCACCGTTCCTCCCAACTCCAACGTGTACTATGAAGTTGAGCTGGTTTCCTTTGTAAAGGAAAAGGAATCGTGGGATCTGAATACACCAGAGAAGATAGAGGCAGTTGGAAAGAAGAAGAAAGAAGGGAATGCACTGTTCAAGGCTGGCAAATATGAAAGAGCATCAAAGAGATATGAAAAGGTATTGTACTCCCTGCAAAAATCTTAG | 627 | 0.429 | MYSFADAFGENGRPASGDEGAIPPNASLQIDLELISWKAVSDITKDNKVLKKTLKEGEGYERPNDGAAVQVKLIGKLQDGTVFVKKGHDDEHPFEFKIDEEQVINGLDKAVMNMKKGEVALVTIHPEYAFGSSGSTQELATVPPNSNVYYEVELVSFVKEKESWDLNTPEKIEAVGKKKKEGNALFKAGKYERASKRYEKVLYSLQKS* | 209 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo14g1789 | 208 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 158 | 202 | - | - | |
| Amo14g1789 | 208 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 51 | 158 | - | - | |
| Amo14g1789 | 208 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 7 | 84 | - | - | |
| Amo14g1789 | 208 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 66 | 158 | IPR001179 | GO:0003755 | |
| Amo14g1789 | 208 | SUPERFAMILY | FKBP-like | 41 | 175 | - | - | |
| Amo14g1789 | 208 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 1 | 38 | IPR001179 | GO:0003755 | |
| Amo14g1789 | 208 | Gene3D | - | 39 | 160 | IPR046357 | GO:0003755 | |
| Amo14g1789 | 208 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 158 | 202 | - | - | |
| Amo14g1789 | 208 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 51 | 158 | - | - | |
| Amo14g1789 | 208 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 7 | 84 | - | - | |
| Amo14g1789 | 208 | Gene3D | Tetratricopeptide repeat domain | 161 | 208 | IPR011990 | GO:0005515 | |
| Amo14g1789 | 208 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 60 | 155 | IPR001179 | GO:0003755 | |
| Amo14g1789 | 208 | Gene3D | - | 3 | 38 | IPR046357 | GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo14g1789 | Amo-Chr14 | 37318447 | 37319251 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo14g1789 | 7 | 200 | Calmodulin-binding Proteins | AT5G48570 | 78.173 | 5.17e-103 | 306 |