Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1682 ATGTCGGTGGGGATGGTTAGCATGATGTCGTTTATGCGGGGTTCTTGGTGTGTTCGTGATAGCTATTATCATTTCCCGTGTCGCTGCCGTATCCATTGTGCTATTACCATCGTCACCATTAATCCGTTGCCACGGGAGCTTTTGCTCATGGAGCTATATTTTTTTAGAGATTACAATTCAGAACAAAACGAGGATAATGTATTGGCAAGAACCCTGTTTCTTGGATTTCATCCACAAACGCAAAGCTTATGGCTGACTGATATTGCGCACCATCATTTAGCTATTGCGATTCTTTTCCTGATAGCTGGTCACATGTATAGAACCAACTTCGGGATTGGCCACAATATAAAAGAGATCTTAAAAGCACACATTCCTCTAGGGGGTAGATTGGGGCATGGACATAAGGGTGAAACTTTCTTAGATTTACTCGAGAGTTGGTATCCCGAGGGAGAGGTTAAAATTTTTATTGAAAGAATAACAAATGAGATGGAGGTGACTCTAAGCGAGGGGGATGCTGATTGCAGAGGGAGTGAATGTGATGCGTATGAGGAGTTGAACCATCGAGAATTTAGCGGTAGTGTGGCCGATGATGAATGTTGTGAGTTGGAAGACCTCGGCGGATTGAGTGGGGATGACATTTTGAAGAAATTCTATAGGAGGTTTGGAAAACTTCATGGATTTGGGGTGCGAAAGGGTTTTTTTTGCAACAAGGAAGGATTGAGGGAATGTAAACACTACGACAGGGTTGTCAGAACGAGGATACACAAACCCGAGACAAGAACAAACTGCAAGGCAATGTTATCGGTGAGGAAGTTGTCGAACACTACCATGAGCTGA 837 0.4349 MSVGMVSMMSFMRGSWCVRDSYYHFPCRCRIHCAITIVTINPLPRELLLMELYFFRDYNSEQNEDNVLARTLFLGFHPQTQSLWLTDIAHHHLAIAILFLIAGHMYRTNFGIGHNIKEILKAHIPLGGRLGHGHKGETFLDLLESWYPEGEVKIFIERITNEMEVTLSEGDADCRGSECDAYEELNHREFSGSVADDECCELEDLGGLSGDDILKKFYRRFGKLHGFGVRKGFFCNKEGLRECKHYDRVVRTRIHKPETRTNCKAMLSVRKLSNTTMS* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1682 278 PANTHER PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A2 70 136 - -
Amo14g1682 278 PANTHER OUTER MEMBRANE PROTEIN, OMPA-RELATED 52 72 - -
Amo14g1682 278 Gene3D Photosystem I PsaA/PsaB 71 149 IPR036408 -
Amo14g1682 278 SUPERFAMILY Photosystem I subunits PsaA/PsaB 40 138 IPR036408 -
Amo14g1682 278 Pfam Photosystem I psaA/psaB protein 75 137 IPR001280 GO:0009579|GO:0015979|GO:0016021
Amo14g1682 278 PANTHER PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A2 52 72 - -
Amo14g1682 278 PANTHER OUTER MEMBRANE PROTEIN, OMPA-RELATED 70 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1682 Amo-Chr14 32928181 32930014 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo14g1682 PsaA_PsaB 1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1682 K02690 - aip:107607009 139.428