Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1635 ATGCTTCCGCATATGAGTGCTGGTGATATTCCCTCTTACTACAATATTGATGATAAAGTGGATAGTTCTGGAATGGAGATGAGCTGCCAAGAAAATGTTGGTGGTAGTGATATTCCTGCATGTTCTACAGCAGGGAATATTTCACATCAAGACCAGCGTTTCAGTAGCTATGTGCAGCAGCCTGCTTTTGTGAGTGGATGGATGTATGTGAATGAACAAGGGCAAATGTGTGGTCCATATATTCAGGAGCAACTATATGAGGGTTTAACTACTGGTTTCTTGCCATTTGAGCTTCCTGTCTATCCTATGATTAATGGCACAATAATGAACCCTGTGCCACTGAATTACTTCAAGCAGTTTCCTGACCATGTCTCTACTGGGTTTGCATATCTGAATTTGGGTTTCTCTGGCTCAAGGGTTCATACAAATGGTCCCTTGTCATCTATGGATATGGCAATATATGGGCAGAATCAATCTTTTGACAATGCTGCTCCTTTGGCTGTTAACTCTGGCTCGCAGTCAGTTCCGCATTCACATGGCAATTACTGCATTAATGAACCTAACCACCAATTTTCAAAGTCAGAGTTGTTCAACAGTATGATATCTTCTCAGATGTTAGGTGAAGAACGTTGTTGGCTTTATGAGGATGAAAAGGGCATGAAACACGGTCCACATTCTATTTCAGAATTGATTTCCTGGCATCATCATGGATATCTTCAAGACTCGTCAATGATATCTCATTTTGGCAATAAGTATGGTTCCTTTCTGCTAGTTGCTGCTGTAAATGCTCTGAAAGGGGATACATCTGGAACCATTTGTAGATCAGGTTCCAAAAACAATGAGCTTGGTGGTACGGTAAACTTAATCTGTGAAATATCTGAGGACATTTCTTCCCAATTGCACTTGGGTGTCATGAAATCTGCCCGCAGAGTTGTGCTCGATGGGGTTATAAGTGATATTATTGCAGAATTTTTTACTGAAAAGAAACACAAGAGGCAGAAGCTTGATTCAACTAACCTGGCTTCTGAGACCTCTGTGGTTGACAGCAAAAGGTCAAATGTTGCTGTGGAGATTAGTAAAGATACTGCTGTTCCGAGTGAGCATGCATCTTCCCATATTGCAGATGATCAGACTTGTCTTGAAATTTCTAGACCATCTTCAACAAGTTTTAAATCGGTTGGAAGTGTTGAGAACTTTTGGTGGTCTTATGCTGTTGTACGTAAAGTACTTGTTGATTATTGCATGCAAGTCACGTGGAATGCTGTATTTTTTGACCCTCTAGCAGAGTACTTATGTTCCTGGAGGAAAAAGAAACTTTGGTCTCATCCTAATCTTCAAATATTTGTTAATGGTTATGGAGAATATGATGGAAAAACTAAATCTGAAGCCGTGAGTATCTTTTGCTTTTTTTTTTTTTTTTGCTTCAGTTGTCCCCATAATGATCATATAATTGTTCTGCAGTTGCTTCTTGGGACAGGTTGTTCTAAATACCCTACCGATGGCTGTAATCAGTTTGGAGTGCTGACAACAGGAACAGATTCTCATTCTAAGTTACCTTCTTTATCTTCTAATGTACCCAAAGATGGAAATTTAATGGAAGGTCAAAGAGTTTCATGCACTTATAGTAACTCCAAAAATTTGACATGCATTATTGAAAGTGTGGAGAATGAGCTTCACTTCTCTTCAAAGGTGTCTTTAGCTGAATACTTTCGAAGTTTTGTTGAAAAGGAAGTGAACAAAATAATTCATTCCCCTCATGAAGACAAATTGAGTAAGGTTGCTGTTAGTGTCTCTGGTTTCTCAGAACTACACACTGGTGAAACTCCTATGAAGGAAATTCTAAATGACAAGTTAGTAGCTACTGTTAAGGCTGAAGATTCAGTTTGTGAGCCTTCATTAGCAAATCATATGTCTAATGTATTCTCGAATGCATTTGAGGAGTTGTGTGGAGGTGTAGAAGTAGTTGATGAAGGGGAAATTGGTGAACTTCCACCTGGATTTGAAGAGAACTTGCACACAATTTTCCCACCACCGAATTTGAAGATTCGACCTTCAAGGGTAGCTGAATGTAATCCTAAGATTACAGAATATGTTGCAACTGCACTGTGCCGACAAAAGTTGCATAATGAAGTCCTAGAAGAGTGGAAATCCGCTTTTTTTTATCCTACATTGAATCAAGCTTTTATGTCTAATAAGAAACGCAGTCATTCTGGTATTCATGAGAAAGGAAAAGCAAAGAAAGCAAGGAAGGAACCTTTAAATGATGCTACTTCTGGACTGGGAAAGATGAAAGAAGGAGCAAAAGGTTCTTCTGGAGTTCCTCTAGTTAATGGAAAGTATACATACCACCGCAAGAAACTGTCACACAAAGAGTTGTGTTCCTCTCAATCTGCTTCAGTGGATGATTCTAGGCCAGGAAAGCAGAATGTGTGTAAGTTAAGGAATTATGTTTTGGGAGATCTGAATGAAACTGCAAAAGTCAAAATAGCTGCTAAGCATGGAAAGGCTAGTGTGGTTAAAGGGAAGAAAGATAAATCTAATAAGAGCAGGTCATCTATCATTGTCAATGGTAGCACAGATGGTGATCGATTGTCCTTGAAGAATAAAACTAGTTCGAAAGCATTGAAACTTTCACATACTGATGGTGTTGTGGATGCCGTAAAATCTAATGAAAGGAGGCTTTCTGCGTCAACAAATAATAGTGTTGGAATGAAGAAGGTGGTTAAAAGCAATACTGAGGATGTCCTAAAATCAAATGAAAAGAAGCTTTCAGCATCAACAAATAATAGTGTTTCCATGAAGAAGGTGGCTAAAAGCAATTGCAGTGATGGCACCATTAAGGGGAAGGCTGCTGGTCATTGCTCCAAACAGAGACCAAGTGCAAATAAAATGTCGAAACAAAAAAGGAAACATTCAACAGATGGTATGCCATCCTTACATCCTGCCAAGTCTTTGAAAATTTCAAACGATGGTGCAAAGCATGGAGCAAGCAAACATGCTACTATTGCAAGGAGGAATTCTGCCAAATCCAAGCCATTGAATTTATGTCCTAGATCTGATGGATGTGCTAGGACTTCCATTGATGGGTGGGAATGGCATAGATGGTCTCAAAGTGCTACTCCTGCATATAGAGCACGTGTCAGGGGAATTGCCTGTATACAAAACAAGTGCATAGATTCAGATAATAATTTATTGCAGCTATCGAATAATAAGGGTCTTTCTGCAAGAACAAATAGGATGAAATTGCGCAACCTTCTTGCTGCTGCCGAGGGTGCAGATCTTCTGAAAGTGCCTCAATTGAAGGCAAGGAAAAAACGATTACGTTTTCAAAGGAGCAAGATACATGACTGGGGTCTTGTTGCAATGGAGCCTATAGAGGCAGAGGACTTCGTGATTGAATATGTTGGAGAACTAATTCGTCCTCGGATATCTGATATCCGTGAACGTCAGTATGAGAAGATGGGAATTGGAAGCAGTTACCTTTTCAGACTTGATGATGGTTATGTGGTTGATGCTACAAAGAGAGGTGGGATTGCAAGATTTATTAACCATTCTTGTGAGCCCAATTGCTATACAAAGGTCATCTCTTTCGAGGGTCAAAAGAAGATTTTCATATATTCAAAACGGCATATTGCTGCTGGTGAAGAGATTACTTATAATTATAAGTTCCCGTTGGAGGATAAAAAGATTCCCTGCAACTGTGGTTCCAGAAAGCTATGGATCACCATCATTGATGATAGGCCAATGGTGATTGGTATACAATTTGGGTCGCCTCCTTGTTCGGTGATGAAATAA 3795 0.3953 MLPHMSAGDIPSYYNIDDKVDSSGMEMSCQENVGGSDIPACSTAGNISHQDQRFSSYVQQPAFVSGWMYVNEQGQMCGPYIQEQLYEGLTTGFLPFELPVYPMINGTIMNPVPLNYFKQFPDHVSTGFAYLNLGFSGSRVHTNGPLSSMDMAIYGQNQSFDNAAPLAVNSGSQSVPHSHGNYCINEPNHQFSKSELFNSMISSQMLGEERCWLYEDEKGMKHGPHSISELISWHHHGYLQDSSMISHFGNKYGSFLLVAAVNALKGDTSGTICRSGSKNNELGGTVNLICEISEDISSQLHLGVMKSARRVVLDGVISDIIAEFFTEKKHKRQKLDSTNLASETSVVDSKRSNVAVEISKDTAVPSEHASSHIADDQTCLEISRPSSTSFKSVGSVENFWWSYAVVRKVLVDYCMQVTWNAVFFDPLAEYLCSWRKKKLWSHPNLQIFVNGYGEYDGKTKSEAVSIFCFFFFFCFSCPHNDHIIVLQLLLGTGCSKYPTDGCNQFGVLTTGTDSHSKLPSLSSNVPKDGNLMEGQRVSCTYSNSKNLTCIIESVENELHFSSKVSLAEYFRSFVEKEVNKIIHSPHEDKLSKVAVSVSGFSELHTGETPMKEILNDKLVATVKAEDSVCEPSLANHMSNVFSNAFEELCGGVEVVDEGEIGELPPGFEENLHTIFPPPNLKIRPSRVAECNPKITEYVATALCRQKLHNEVLEEWKSAFFYPTLNQAFMSNKKRSHSGIHEKGKAKKARKEPLNDATSGLGKMKEGAKGSSGVPLVNGKYTYHRKKLSHKELCSSQSASVDDSRPGKQNVCKLRNYVLGDLNETAKVKIAAKHGKASVVKGKKDKSNKSRSSIIVNGSTDGDRLSLKNKTSSKALKLSHTDGVVDAVKSNERRLSASTNNSVGMKKVVKSNTEDVLKSNEKKLSASTNNSVSMKKVAKSNCSDGTIKGKAAGHCSKQRPSANKMSKQKRKHSTDGMPSLHPAKSLKISNDGAKHGASKHATIARRNSAKSKPLNLCPRSDGCARTSIDGWEWHRWSQSATPAYRARVRGIACIQNKCIDSDNNLLQLSNNKGLSARTNRMKLRNLLAAAEGADLLKVPQLKARKKRLRFQRSKIHDWGLVAMEPIEAEDFVIEYVGELIRPRISDIRERQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISFEGQKKIFIYSKRHIAAGEEITYNYKFPLEDKKIPCNCGSRKLWITIIDDRPMVIGIQFGSPPCSVMK* 1265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1635 1264 SUPERFAMILY SET domain 1100 1237 IPR046341 -
Amo14g1635 1264 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 21 1238 IPR044570 GO:0042800|GO:0051568
Amo14g1635 1264 ProSiteProfiles GYF domain profile. 209 265 IPR003169 GO:0005515
Amo14g1635 1264 SUPERFAMILY GYF domain 204 261 IPR035445 -
Amo14g1635 1264 CDD SET_SETD1 1093 1238 - -
Amo14g1635 1264 Pfam SET domain 1117 1221 IPR001214 GO:0005515
Amo14g1635 1264 MobiDBLite consensus disorder prediction 732 774 - -
Amo14g1635 1264 ProSiteProfiles SET domain profile. 1105 1222 IPR001214 GO:0005515
Amo14g1635 1264 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 21 1238 - -
Amo14g1635 1264 Gene3D SET domain 1036 1243 IPR046341 -
Amo14g1635 1264 Gene3D - 198 278 IPR035445 -
Amo14g1635 1264 SMART set_7 1105 1228 IPR001214 GO:0005515
Amo14g1635 1264 MobiDBLite consensus disorder prediction 948 1008 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1635 Amo-Chr14 30325972 30335147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1635 1104 1234 C2H2 Transcription Factor Family AT2G23740 34.641 5.33e-15 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Amo14g1635 SET 5.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1635 - - aip:107636228 2368.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1635 14 30325972 30335147 Amo04g0496 04 10771452 10778764 hybridization