Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1628 ATTAGACCCGAACCCGACCCTAAACCCGATGAAACCAATACACTTTCGGGCCACAATTATACCGGTGTTCGGGACCGGGTCGGGTCGGGTCTGTGCACCCCTAGTACAGACTCTCTACTATTAGTCGACAAACAAATGGTGAGAGAGGGAAAAAAAATGGAAAGGGATGTGTGTGATCTTTCTCCCACATGGGATTGTGAAAATGGCAATAATTCTGTGGAGAAGAGGCTAAGGCTATTTGGATTTGAGCTGAATCCACCTTCAAACAATATGAAAGATCCTAACACTACAGAAGGATCAGATGAAAGGGACAAAACCACAGCACAAGATCAAAGAACCACAACCAATAATAATAATGAGAAGAAGTTTGAGTGCCAATACTGTTTGAAGGAATTTGCAAATTCACAAGCACTTGGTGGGCACCAAAATGCTCACAAGAAAGAGAGGATGAAGAAGAAAAGGCTGCAGCTTCAAGCAAGGAAAGCCACCATAAACTACTATCTTCAACAACCCAATTTCCAAAACAACAATTATCATGGTTTTTCTTACCATAATCAGAATCATAATAACAATAACACACCTTGGTTCTATGATCCTTCTTCCTACAACTACTATTCTGACTTCACAGTTTGTGAAGAATCTCAAATTAGCTTCAACCCCAATGATCAAGATTCAAACTTTTTGGTTGAGAAAGCATCAAATAGTAATTGGTATTCATCTCTGCCATCATCATATCAAGCTGCTTCTTCTTCACAACAAGATTCTTGCATGTTCAATTTCTCTAATACTAGTATAGATAATAATAATAATAATAATAGGGCCTACAACATCTTCAAGCCTTGCAACTTTCTTGATTCTTCAAATCATCAAATACAAAGCCATAGTAGTAATAACAAAGCTTTGGATCTTCAATTAGGTCTCAATTTGGAGTCAAATACAAAAAGGGCCTAA 951 0.3807 IRPEPDPKPDETNTLSGHNYTGVRDRVGSGLCTPSTDSLLLVDKQMVREGKKMERDVCDLSPTWDCENGNNSVEKRLRLFGFELNPPSNNMKDPNTTEGSDERDKTTAQDQRTTTNNNNEKKFECQYCLKEFANSQALGGHQNAHKKERMKKKRLQLQARKATINYYLQQPNFQNNNYHGFSYHNQNHNNNNTPWFYDPSSYNYYSDFTVCEESQISFNPNDQDSNFLVEKASNSNWYSSLPSSYQAASSSQQDSCMFNFSNTSIDNNNNNNRAYNIFKPCNFLDSSNHQIQSHSSNNKALDLQLGLNLESNTKRA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1628 316 SUPERFAMILY beta-beta-alpha zinc fingers 119 150 IPR036236 -
Amo14g1628 316 Gene3D Classic Zinc Finger 97 177 - -
Amo14g1628 316 MobiDBLite consensus disorder prediction 81 117 - -
Amo14g1628 316 PANTHER ZINC FINGER PROTEIN 5 70 309 - -
Amo14g1628 316 PANTHER ZINC FINGER PROTEIN 5 70 309 IPR044299 GO:0010090
Amo14g1628 316 ProSiteProfiles Zinc finger C2H2 type domain profile. 123 150 IPR013087 -
Amo14g1628 316 Pfam C2H2-type zinc finger 123 148 - -
Amo14g1628 316 ProSitePatterns Zinc finger C2H2 type domain signature. 125 145 IPR013087 -
Amo14g1628 316 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1628 Amo-Chr14 30161802 30165912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1628 74 171 C2H2 Transcription Factor Family AT1G10480 55.769 4.51e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1628 - - adu:107488933 455.292