Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1539 ATGGATTCGCAGTCGCATTTCACTGTTGGAGAAGATGACTCGGGCAGTCTTAGTGAGGAGGAGTATTTCCGCGTGTCTTCTCCGATTGGGGATGACGAGGATGAATCCTTTCACAGTGACTCCGAGACGGCCGAAACGGGTGAGGAAACCCATGGGAACGGGGTCGGGCCAGGGCAGGAGACATGTGAACCTGATGCTCCCGGTTTTAGGTCGACGGACGATTTCTTAGACAAAGTGTTCAGTACCGAGGAAGATGCTTACGCGGCATACAAACAGTTTGCCAGACTCAGGGGGTTCGGTGTAAGGAAGGGTGACGTGGCTCGAATGAATGGTCTTTTGGTAAGACGAGACTTTTTTTTGTCATCTCGCACGGGTTGTTCAGCGAAGCTGAAAATTTACTATGATCTTCAAGATCAGGTTTGGAAAGTCCGGAGAATAGACGACAACCATAACCACCCTCTTGCTACAACTATGTTTCGACATCTTCTTCCGAGTCATCGCAATCTGAGTGACAGTGACAAAGCTCAAGGAGGCTGGTTCCTCGACAAATGCAGAACTTGGGGGAGTAGGCGTTGCTGCACTTCTTGTGGGCATCCCGGGCACACGAAGAGGACGTGCATTTCTCAAAGGGAGATGAGCCAAGCTGGCATTCGAGAAGGGACTTCAGCGACGGTCGAGATTCGATCCTCCGGAGAGACTAGCGGGAATCGTTCGGGGCGTAGTTGCTCGGAGGCTGCACCTGGCATCTCTCAACCTGGTTTTCCCGGCGGCACCGACCAATACGTACCAAGACCCCCCGAACCGAATGCAGCAAAGTCTAGTCTACCCCGGATAAGCCCAGGGGTTGCCGGCGGCAACTTCTTCCTCGGGGGGCAGCAGATACACCAGTTCTTTGCAGCTCCCAGCTGTTCAACACTCCACCGGGTAGAGCCTAGTCAAGCAGCTGCGGCGATTTCCTCACCTGAAGAAGCTCCCGCTATGACTGCTACGCACTTTAGTACGCCGGGTTCTGATGCCTTCCAACAGTGGGTTCTAGAGAATGCATTGGGTAACTCTCGGTCCGCCAACAGGTCCGGAGGGAACTTCTAA 1089 0.5354 MDSQSHFTVGEDDSGSLSEEEYFRVSSPIGDDEDESFHSDSETAETGEETHGNGVGPGQETCEPDAPGFRSTDDFLDKVFSTEEDAYAAYKQFARLRGFGVRKGDVARMNGLLVRRDFFLSSRTGCSAKLKIYYDLQDQVWKVRRIDDNHNHPLATTMFRHLLPSHRNLSDSDKAQGGWFLDKCRTWGSRRCCTSCGHPGHTKRTCISQREMSQAGIREGTSATVEIRSSGETSGNRSGRSCSEAAPGISQPGFPGGTDQYVPRPPEPNAAKSSLPRISPGVAGGNFFLGGQQIHQFFAAPSCSTLHRVEPSQAAAAISSPEEAPAMTATHFSTPGSDAFQQWVLENALGNSRSANRSGGNF* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1539 362 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 27 186 - -
Amo14g1539 362 MobiDBLite consensus disorder prediction 1 68 - -
Amo14g1539 362 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 27 186 - -
Amo14g1539 362 ProSiteProfiles Zinc finger CCHC-type profile. 193 206 IPR001878 GO:0003676|GO:0008270
Amo14g1539 362 MobiDBLite consensus disorder prediction 25 47 - -
Amo14g1539 362 MobiDBLite consensus disorder prediction 212 277 - -
Amo14g1539 362 MobiDBLite consensus disorder prediction 212 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1539 Amo-Chr14 27583080 27586236 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo14g1539 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1539 - - ahf:112717862 313.538