Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1528 ATGTCTCGACTTCTCATTCTACCCAAACACTTTGCTTCCATCAACAATCCATGGCCATGGCTTTCTTTGAGACTCTTCTCAACCCGTTCTTCTTCTTCAAGACCCAAAGGCAACTCTTTCACTGTCTCATACCTCGTTGGAAATTGCGGGTTCTCACCAGAACGTGCAGTTTCCGTTTCCAAACGCTTTAGCTTCAAAACAAGCGAAAGGCCAGACACAGTGATTGCGTTCTTCAGGAACATTGGTTTATCCCAAACGACACTGTTCAGAGTCCTCCAGTCCATGCCACAGTTACTCGTAGCCAGTCCCGAGAGATCTTTGCAGCCAAAAATCGATTTTTTTAAGTCCAAAGGGTTTTCTACCTCTGATATATGCAAGACCATTGTTAATAACCCTTTGATCCTCATCCGAAGCGTGCAGGTTCAGATAGCTCCCGCGTTTGATTTCTTCGATGACATGTTTCCGTCTAGGGACAAGCTCATCAAAGCTGTTATGCGTAATTCCAGTATTCTCTATGACTTTAAAATATATGTAGAACCTAATATAAAGCTGCTTAGAGAAGCAGGAGTTCCTATTTCACATGTTATTAGGTTAATAGAATACTGCCCTCGCCAATTGAAGGCAAACCCTAAGAGGTTTAAGGAGGTATTGCAGGAAATTAAGGAGATGAAGTTTGATCCCTTCAAGTTTCAATTTGTTGTGGCTATTTATGTGAATGTAACCGTAGGAAAATCCTCATTGGCAAGAAGGAAAGGTATTTATAGAAAGTGGGGTTGGACCGATGGCAATATTTTTGCAGCATTTAGAAACCATCCGTGGTGTCTTGTCATCTCGGATGACAAGATTGAAGCAATGATGGATTATCTGGTGAATGGATTGGGTTATTCAGCTTCTTCTATATCTAGTAATCCCTGGGTGTTGTCCATGAGTTTGAAAAGGCGGATTATTCCGAGGGGTTCTGTTATTCTAGTTTTGCAGTCTAAGGGTCTGGGCAGGAAGCTGGGCTTGGGTACAATATTTAGGTGCAATGAAAAGATCTTCTTGGATAAGTTTATCTTCCGCCATGAGAAAGAAGCTGACGATCTATTGAAGTTCAATCCATGGCTATGGCTTGCTTCGAGACTCATCTCAACCTCGTCTCCTTCTTCAGCCTCCAAAGACAACTCTTTTGCATTCTACCTAACTCATACTTGTGGGTTCTCACCAGAACGCGCTACCACCATTTCCAAGCGCCTCAAGTTAGAAACAAGTGAAAAACCAGACACAGTGATTGAGTTCTTCAAGAACCAAGGTTTGTCCCAAACTATGATCTCGAAAGTCCTTCGAACTGTTCCAGACTTACTTTCAGTCAAACCCGAGAACACTTTGCAGCCAAAGTTTGATTTTTTCAAGTCAAAAGGGTTTTCTATCTCTGACATTCACAACATCATATTAACATCCCCTGAAATTCTCAAAAGAAGCTTGAATAATGAGATCATTCCCTGCTTCAATTTCCTTGACAACATGTTTGAATGTAAGCACAACCTCATGAAAACTGTTGTAAGCTATTCAGGTGTTCTACATGTCTTTGCCAAACGTATTGAACCTAATATCAAGCTGCTGAGAGAAGAGGGTGTTCCTGAATCACACATTGTTAGGTTGTTAGAATACTATGGCAAGACAATTAAGGTATGTCCTACGCGATTTAAGAGGGCAGTGGAGGAAGTGAAGGAGATGAAGACTGATCCACTCAAGTTGCAATTTGTTATATATGTTCATATAAAGTTACATCTGAGCAAATCCACATGGGAAAGAAAGAAAGGTATATATAGAAAATGGGGTTGGACCGAGGATGATATTTCTAAAGCATTTAGAACCCACCCGTTCTGTATGTGCACTTCAGACAGTAAGATTGAGGCGGTCATGGATTTTCTGGTGAACACATTGGGCTGCAAATCTTCTGACATTATCAGATGTCCATCACTGTTGACCATGAGCTTGAGAAAGCGAATTATTCCAAGGGGCTCTGTTGTTAGAGCTTTGCTGTCGAAGGGTCTGATTAAGAAGCTGAGCTGGACTGTATTTCGGTATAATGAATTGGAGTTCCTGGATAAGTTTGTCCATTGTTATGACAAGGAAGCCAATGAGTTATTGAAGTTGTATCGGGTTGTGTTTGCTGTGCCATTTAAACAGGTTGGGAACTTCTATCATAGTTGTAAGAACCGGACCGGACTGGCCGGTCTAACTGGAAAATTGGTGAACCGGTCATCTAGCCGGTCCGGTTGA 2265 0.4172 MSRLLILPKHFASINNPWPWLSLRLFSTRSSSSRPKGNSFTVSYLVGNCGFSPERAVSVSKRFSFKTSERPDTVIAFFRNIGLSQTTLFRVLQSMPQLLVASPERSLQPKIDFFKSKGFSTSDICKTIVNNPLILIRSVQVQIAPAFDFFDDMFPSRDKLIKAVMRNSSILYDFKIYVEPNIKLLREAGVPISHVIRLIEYCPRQLKANPKRFKEVLQEIKEMKFDPFKFQFVVAIYVNVTVGKSSLARRKGIYRKWGWTDGNIFAAFRNHPWCLVISDDKIEAMMDYLVNGLGYSASSISSNPWVLSMSLKRRIIPRGSVILVLQSKGLGRKLGLGTIFRCNEKIFLDKFIFRHEKEADDLLKFNPWLWLASRLISTSSPSSASKDNSFAFYLTHTCGFSPERATTISKRLKLETSEKPDTVIEFFKNQGLSQTMISKVLRTVPDLLSVKPENTLQPKFDFFKSKGFSISDIHNIILTSPEILKRSLNNEIIPCFNFLDNMFECKHNLMKTVVSYSGVLHVFAKRIEPNIKLLREEGVPESHIVRLLEYYGKTIKVCPTRFKRAVEEVKEMKTDPLKLQFVIYVHIKLHLSKSTWERKKGIYRKWGWTEDDISKAFRTHPFCMCTSDSKIEAVMDFLVNTLGCKSSDIIRCPSLLTMSLRKRIIPRGSVVRALLSKGLIKKLSWTVFRYNELEFLDKFVHCYDKEANELLKLYRVVFAVPFKQVGNFYHSCKNRTGLAGLTGKLVNRSSSRSG* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1528 754 PANTHER CGI-12 PROTEIN-RELATED 33 365 IPR003690 GO:0003690|GO:0006355
Amo14g1528 754 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 33 365 - -
Amo14g1528 754 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 384 715 - -
Amo14g1528 754 PANTHER CGI-12 PROTEIN-RELATED 384 715 IPR003690 GO:0003690|GO:0006355
Amo14g1528 754 SMART mt_12 89 120 IPR003690 GO:0003690|GO:0006355
Amo14g1528 754 SMART mt_12 438 469 IPR003690 GO:0003690|GO:0006355
Amo14g1528 754 SMART mt_12 474 506 IPR003690 GO:0003690|GO:0006355
Amo14g1528 754 SMART mt_12 510 540 IPR003690 GO:0003690|GO:0006355
Amo14g1528 754 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Amo14g1528 754 SMART mt_12 196 226 IPR003690 GO:0003690|GO:0006355
Amo14g1528 754 SMART mt_12 125 155 IPR003690 GO:0003690|GO:0006355
Amo14g1528 754 SMART mt_12 614 645 IPR003690 GO:0003690|GO:0006355
Amo14g1528 754 SMART mt_12 297 331 IPR003690 GO:0003690|GO:0006355
Amo14g1528 754 SMART mt_12 646 680 IPR003690 GO:0003690|GO:0006355
Amo14g1528 754 SMART mt_12 161 191 IPR003690 GO:0003690|GO:0006355
Amo14g1528 754 Pfam mTERF 589 691 IPR003690 GO:0003690|GO:0006355
Amo14g1528 754 Pfam mTERF 424 553 IPR003690 GO:0003690|GO:0006355
Amo14g1528 754 Pfam mTERF 245 347 IPR003690 GO:0003690|GO:0006355
Amo14g1528 754 Pfam mTERF 76 226 IPR003690 GO:0003690|GO:0006355
Amo14g1528 754 Gene3D Transcription termination factor 3, mitochondrial 505 713 IPR038538 -
Amo14g1528 754 Gene3D Transcription termination factor 3, mitochondrial 172 364 IPR038538 -
Amo14g1528 754 Gene3D Transcription termination factor 3, mitochondrial 54 171 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1528 Amo-Chr14 27394152 27403004 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Amo14g1528 mTERF 4.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1528 K15032 - twl:120002213 304.293