Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1480 ATGCTTGGTCCTGAAACAGAACTTAAGATAAGTTTTGGCTACCAATGCAATGGCATTGCAGATATCTCGTGCAAGTCTATCAACGGCTACAAAATCCTTCCTTATTTCCCTAGAACAAGCAGTTTCTCTTGCTTGTCTGGTGCTGCCGTTAGCGCAAATGCTACACTTGCCAACACAAACATCTGCAATGGTGTGATAGGGGAAGAAATCCTTCCTAGTTTGGACTCTCCTAAATCGTTTCGTAAGATACCCTCTTCGCCAAGTCTTTCGAAGTTGGACATACTATCATCTTCTCTCCATGGTAGTTTCTCAAACCTCAGTTGCAGTCCATCCACACAAAGTGATATGTTTGATTATGACGCTTGTATGGTGAGTGCTCCTTGCAAAAGTGAAGGATTTCTCAATGCTATGGAAGTACAAGTAGCAGGGGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGCTGGCTCTTTTGTGGAATTTATGATGGCTTTAATGGCAGGGATGCAGCTGACTTTCTGGCCTGTACCCTTTACGACACTATCATATCTTATTTTAATATGCTGTATTTGGATTTGGAATCAGATTCTATCAAAGCTTCCAACAGTCTTGATTTGGGTGGATCATCTCAATATGAGTTGGATGAGCGTCAATCTCGTTCTCAGAAATCATTTTCACATGCTATTCTTGATAGCCTCCAACGTGCTCTCAATCAGGTTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGACCGTCCGGATTTAGTTTCTGTCGGATCTTGTGTTTTACTTGCACTTCTTCATGGGGAAAATTTGTATACACTTAATCTTGGTGACAGCAGAGCAGTATTGGCAACGTGCAGTATGGATGGCGGAATGAGTGGCAAAGAGAGAAGAATGAAAGCTATCCAGCTTACTGATATTCATACTGTTGACAATGGAGCCGAAAGAGCTCAACTTCTTGCTGGTCACCCTGATGATCCCAAGGCCATCGTAGCTGGGAAAGTGAAAGGAAAATTGAAGGTTACTCGCGCTTTTGGAGTTGGCTACTTGAAAAAGAAAATTCTGAATGATGCATTGATGGGAATTCTTCGAGTGCGTGATCTCATAAGCCCACCATACATTTCCATTCAACCGTCACTAAATGTGCATAGAATCTCAAGTTCCGATCAATTTGCTATAGTTGCGAGTGATGGTTTGTTCGATTTCTTCAGCAATGATGAAGCAGTAGAGCTTGCAGAGTCTTACATCCTAAGCAATCCATTTGGTGATCCAGCAAAATTCCTTGTTGAGCAACTTATAGCAAGAGCTGCTGATTCTGCAGGTTTTAGCACGGAAGAGTTGATGAATGTTCCGGCCGGGAGGAGGAGGAAGTACCATGATGATGTGACCGTGATTGTCATCATCCTTGGGATGAATCAACGGACGTCAAAGGCATCAACTTGCATCTAA 1476 0.4268 MLGPETELKISFGYQCNGIADISCKSINGYKILPYFPRTSSFSCLSGAAVSANATLANTNICNGVIGEEILPSLDSPKSFRKIPSSPSLSKLDILSSSLHGSFSNLSCSPSTQSDMFDYDACMVSAPCKSEGFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCGIYDGFNGRDAADFLACTLYDTIISYFNMLYLDLESDSIKASNSLDLGGSSQYELDERQSRSQKSFSHAILDSLQRALNQVENDFLYMVEQEMEDRPDLVSVGSCVLLALLHGENLYTLNLGDSRAVLATCSMDGGMSGKERRMKAIQLTDIHTVDNGAERAQLLAGHPDDPKAIVAGKVKGKLKVTRAFGVGYLKKKILNDALMGILRVRDLISPPYISIQPSLNVHRISSSDQFAIVASDGLFDFFSNDEAVELAESYILSNPFGDPAKFLVEQLIARAADSAGFSTEELMNVPAGRRRKYHDDVTVIVIILGMNQRTSKASTCI* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1480 491 Pfam Protein phosphatase 2C 225 432 IPR001932 -
Amo14g1480 491 Gene3D - 117 487 IPR036457 -
Amo14g1480 491 SMART PP2C_4 124 476 IPR001932 -
Amo14g1480 491 ProSiteProfiles PPM-type phosphatase domain profile. 133 478 IPR001932 -
Amo14g1480 491 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 213 490 - -
Amo14g1480 491 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 208 - -
Amo14g1480 491 CDD PP2Cc 146 478 IPR001932 -
Amo14g1480 491 PANTHER PROTEIN PHOSPHATASE 2C 2 208 IPR015655 GO:0004722|GO:0006470
Amo14g1480 491 PANTHER PROTEIN PHOSPHATASE 2C 213 490 IPR015655 GO:0004722|GO:0006470
Amo14g1480 491 SUPERFAMILY PP2C-like 147 479 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1480 Amo-Chr14 25263079 25266733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1480 4 491 PP2C-type Phosphatase Gene Family AT3G16560 63.673 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1480 - - gmx:102666789 712.22