Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1478 ATGTTCTCCTCGATGGCATCTTCATTTTACAAAACACTCCATCCTTCATCCACGCCGCTTCTCACCGATTTGCTCCTAATCCTTCATCATCGGCGCCTTTCGCCCCTTCACCGCCGTTCCCGAAGCTCCATCACACCCCTTCCCCAATATCTCTCTTTCAGTTTCGATGCCGATGAATTTCGCTACCTTCTCCACGCCGTTTTCTGTCGCTGCTCGCTAAAGCTCGTCAGCGTCGTCGCCGCCGCTTCTACCTATTCTTCTCGTCGCCGTTGGTTCAGTGATTTGGTTGTAGCTTCTCCTGTGGAGGATTACTTTTTATACATTGATGATCTGAAAAATCCTGATAAGGAAGAAGCTGAGAAAATTACACAACCATATTTAGATGCTCTTGGTGAAGACTATTCTGAACTGCTTTTTTTTCCTCTGCAAAGCTGCATGAACCATTCCTGTAGTTCTAATGCCAAAGCCTTCAAGAGAGACGAGGATAGGGATGGCCAAGCAGCCATAATTGCAGTAAGGCCGATTCGAAAAGGAAAAGAGTGGCAATCAAAGGAGTGGCATTTGAATGATACTGAAAAGACCATTATATTTAGTAACACTGTTTCACTGCCCGACGATGTCGACTCTTCTGATGAAGAACTCTCTGATCCAAGCAACTTGGATTACTTGGAGAGGCCAATCTCACACTACTACGATGAGGATGAACTCTTTGGATGTAAACTCCCTAAACCCCAACGCTCCAATGGCATCCTCAAGAAAGACAGAACTATCACAGAGGACACTGAAAGACCTCATTTAGCATATTACAACACCAGTTGCAATAGTCAATATGCCTGGCAAACCCTTATCACTTATGATGCCTGCATATGCTTGTGCCTGCAAGCATGGGCAAGAGGCTGCACTGAGGCACCGGAGTTTTTGAAAGATGAGTGCCTGGCTCTTCGAAGTGCCTTTGGCATTCAACTGCCACTAAGTTCCAATTTCTTTGGTTTCATTTTCTACTTGGCTCCTGATGATGATGACCAGAATGCAAATCTGGAAGTTAAGTTCTTTGCTCGGCTACCAAATAAGGAGGAAGTGGTGATAAAAGAGTGTGGCATCCGTTGGATATACACAAACATGGAGAAGGAATCAAGAGGAGAAACAGGGGGGTTCGAATCTGATGATGAAGGGGAAGAACTAGTTCCTCCAGCAAAGAAATTTAAGCATAGCTTAATGGAAGTTGAATCAGTAGAAAACTTGAGAAAAAAGCTTGAACAACTTTTGCACATTCAATTTGATGGAGGCTCTCTTATTAGCGCAGAGATCAAATTGGGGTACAATATAAGGTTCAAGCAAACTCAGATCAGGCTATGGTTTGGAATCAGCTCAAAGCAGGATCCTTCCAGTTCAATGAAGACTGACAGGGATATGAAGTTTCTATACCACCCTCCTCCTCCCTTATGTGATGTGATGAGAGAATAA 1464 0.4413 MFSSMASSFYKTLHPSSTPLLTDLLLILHHRRLSPLHRRSRSSITPLPQYLSFSFDADEFRYLLHAVFCRCSLKLVSVVAAASTYSSRRRWFSDLVVASPVEDYFLYIDDLKNPDKEEAEKITQPYLDALGEDYSELLFFPLQSCMNHSCSSNAKAFKRDEDRDGQAAIIAVRPIRKGKEWQSKEWHLNDTEKTIIFSNTVSLPDDVDSSDEELSDPSNLDYLERPISHYYDEDELFGCKLPKPQRSNGILKKDRTITEDTERPHLAYYNTSCNSQYAWQTLITYDACICLCLQAWARGCTEAPEFLKDECLALRSAFGIQLPLSSNFFGFIFYLAPDDDDQNANLEVKFFARLPNKEEVVIKECGIRWIYTNMEKESRGETGGFESDDEGEELVPPAKKFKHSLMEVESVENLRKKLEQLLHIQFDGGSLISAEIKLGYNIRFKQTQIRLWFGISSKQDPSSSMKTDRDMKFLYHPPPPLCDVMRE* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1478 487 Pfam SET domain 92 180 IPR001214 GO:0005515
Amo14g1478 487 Gene3D SET domain 81 181 IPR046341 -
Amo14g1478 487 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 94 180 IPR044237 GO:0008168
Amo14g1478 487 SUPERFAMILY SET domain 104 180 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1478 Amo-Chr14 25170929 25175396 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Amo14g1478 SET 3.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1478 - - aip:107628408 270.011