Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1471 ATGGACGGCAACAAGGATGAGGCGCTGCGCTGCCTTCGAATAGCTGAGGAAGCGATCGCAGCCGGCAACAAATCCCGCGCCCTCAAATTCATCGGAATCGCTCAGCGGCTCAACCATAACCTCCCCGTCGATGATTTGCTGAACATGTGCGAGTGCCTCGATTCTCAGTCCTCTGCGTCTTCTTCTTCTTCAGAACATAAAGGTAACGAAAATCGCGTTAAGAGCAAACCGAACGGTATATCGAAAACTGATGACGAGGGTTTGAACGAGGAGAGGAATTACACGGAGGAGAATGTGAAGTTGATTAGGGAAATTAAATTGAAGAGTGATTACTATGCGATCTTGGGAGTTGAGAAGAGTTGTTCGGTTGAAGAGATTAGAAAGGCTTATAGGAAACTTTCCTTGAAGGTTCATCCGGATAAGAACAAGGCACCAGGTTCCGAAGAGGCCTTTAAGAAGGTCTCAAAAGCATTTAAATGCTTGAGTGATGATAGTTCTAGAAGGCAGTATGATCAGACTGGATTGGTGGATGAATTCGAGTACAATCAGCAGTACAGCGTTCCGCGCCGGAGGAGGAGAACGGCAGCAAGCCGGGATTTCTTCGAGGATGATTTCGATCCGGACGAGATATTCAGGGCATTTTTTGGACAATCTGATGTGTTTGGGAGGCAACATGTTTACAGAACAAGGGCAACCACCCATGATCATCATTATCAAAGACATGGTTTTCAGGGTGTTGCAGGTGGAACGGGGCTTAATATTATGCTCCTTGTTCAGTTGTTGCCGTTCTTGATCATTTTGCTGCTTGCTTACCTGCCATTCTCTGAACCTGAGTATTCTCTGTACAAGAATTACTCATACCAGTTTCCCAAGACCATAGAGAATTATGGGATTCAATATTTCGTAAAGTCTCAAGCTTTTGATCGTAACTATCCACAGGGGAGTGCTGCTCGCACTACCATTGAGGACAATGTTATAAAAGATTATAAGAATATGCTTCGGCGTTATTGTCAGATTGAGATTCAGAGGCGGAGTTGGAATAGGAATCTGCCTACTCCTCACTGTGAAAAGTTGCAAAACTTTGGAGTAGTAGCCTGA 1098 0.4499 MDGNKDEALRCLRIAEEAIAAGNKSRALKFIGIAQRLNHNLPVDDLLNMCECLDSQSSASSSSSEHKGNENRVKSKPNGISKTDDEGLNEERNYTEENVKLIREIKLKSDYYAILGVEKSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFKCLSDDSSRRQYDQTGLVDEFEYNQQYSVPRRRRRTAASRDFFEDDFDPDEIFRAFFGQSDVFGRQHVYRTRATTHDHHYQRHGFQGVAGGTGLNIMLLVQLLPFLIILLLAYLPFSEPEYSLYKNYSYQFPKTIENYGIQYFVKSQAFDRNYPQGSAARTTIEDNVIKDYKNMLRRYCQIEIQRRSWNRNLPTPHCEKLQNFGVVA* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1471 365 MobiDBLite consensus disorder prediction 67 91 - -
Amo14g1471 365 Pfam Domain of unknown function (DUF1977) 275 344 IPR015399 -
Amo14g1471 365 SUPERFAMILY Chaperone J-domain 109 222 IPR036869 -
Amo14g1471 365 ProSiteProfiles dnaJ domain profile. 110 174 IPR001623 -
Amo14g1471 365 MobiDBLite consensus disorder prediction 57 91 - -
Amo14g1471 365 PANTHER AT29763P-RELATED 1 363 - -
Amo14g1471 365 CDD DnaJ 110 163 IPR001623 -
Amo14g1471 365 PANTHER CHAPERONE PROTEIN DNAJ 49 1 363 - -
Amo14g1471 365 Pfam DnaJ domain 110 171 IPR001623 -
Amo14g1471 365 PRINTS DnaJ domain signature 112 130 IPR001623 -
Amo14g1471 365 PRINTS DnaJ domain signature 130 145 IPR001623 -
Amo14g1471 365 PRINTS DnaJ domain signature 146 166 IPR001623 -
Amo14g1471 365 SMART dnaj_3 109 166 IPR001623 -
Amo14g1471 365 Gene3D DnaJ domain 107 227 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1471 Amo-Chr14 24992637 24996066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1471 4 171 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 27.168 5.91e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1471 K09518 - egt:105948727 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1471 14 24992637 24996066 Amo14g1471 14 24992637 24996066 ECH
Amo14g1471 14 24992637 24996066 Amo04g0349 04 6160606 6162146 hybridization