Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1449 ATGTCATCGACGCCTACATCATGCGCGGCATGCAAGTTCCTTCGTCGGAAGTGCACACCGGAGTGCATTTTCGCACCGTACTTCCCAGCGAACGACCCAGAGCGCTTCGAATGCGTCCACCGCGTCTTCGGCGCCAGCAACGTCGGCAAGATCCTCAACGAGCTACATCCATCCCAGCGCGAGGATGCGGTGAAGTCCCTTGCGTTCCAGGCGAAGGCACGCCTCCGCAACCCGGTCTATGGCTGCACCTTCCAAGTCTCCATCCTCCAGCAGCTCCTCCGCCAGAGACGTGCCGTCCTCGAAAACGCCAAGAGAGAACTTAGTGCCTACATCAACCCGCCAGCCATTCAAGGTCCATTCAACCCTCAGGAAAAGCCTCTGTCTTCACCTCCCGTCCATTTAGGCCCTCCCTGCGGCCCCAATGTTGTACAGTATTCAGCCCATTTAGGCCCATCCTACGATCCAAATGTTGTACACTCTTCAGCCCATTTGGGCCTATCGAACGCTATGCAGCATAATAGGTCATTGGGTGGTGGTGGTGCTGTCCCGCAGCCGGACCCATGGCTGCAAGAGTTGTTGGAGGCCCAACAACTTGCTGCTGCTGTGGCATTCCGAGAACAGCAACAGGAGTATCTAAGACACAATGCTGCTGCTGGGATTGAACCTGTTGCGACTGCGGCACCCTACGGCGGTAATGTCAGTGGAAGTGGAGTGTTTGGCCACATGGGTGCACCTTCAGGCGGTCAAGGAGGTGAGATGGCACCTTGTATGGGTTTGGGGACATTTGATAGTGGTGGAAGTTATCATCCACAATTGCAACAACCACCACAGCATGGAGTATGGCATTAA 849 0.5559 MSSTPTSCAACKFLRRKCTPECIFAPYFPANDPERFECVHRVFGASNVGKILNELHPSQREDAVKSLAFQAKARLRNPVYGCTFQVSILQQLLRQRRAVLENAKRELSAYINPPAIQGPFNPQEKPLSSPPVHLGPPCGPNVVQYSAHLGPSYDPNVVHSSAHLGLSNAMQHNRSLGGGGAVPQPDPWLQELLEAQQLAAAVAFREQQQEYLRHNAAAGIEPVATAAPYGGNVSGSGVFGHMGAPSGGQGGEMAPCMGLGTFDSGGSYHPQLQQPPQHGVWH* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1449 282 Coils Coil 86 106 - -
Amo14g1449 282 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Amo14g1449 282 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 4 216 - -
Amo14g1449 282 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Amo14g1449 282 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1449 Amo-Chr14 24661438 24663175 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1449 1 116 AS2 family AT5G66870 62.069 6.50e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo14g1449 LOB 1.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1449 - - ahf:112710769 459.529