Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1448 ATGTTTAAATATGGAAAAAACTTTAATTCCCGGAATACGCACCAAATGAAAACATTTCTGAAATACGCAGGGCCACCTCATGGGCGTCGTCCGCGAAATGGAGAAGCACGTCAACTCACTCTCGGCGGCCGCGAATTGGAGCTGACATGGGCAGCTTTCCCATTTTGTGCATGGCAGGAACAAAATGACCCACTCCACCCCCGGCGCACACGACTTGGACCATATCAAGATCTGCGCCAGCGAAATAGGGCAATTAGCTTGCGGCAGACACAAAATGGAGACTTGCTTTTGGGATTCAACACCTTCTTGCCAAGGGGTTATGAAATCACACTTCCACTGGATGATGAACAACCTGCCCCAAAGAAGCCTGTTGAATTTGAAGAAGCGATTAATTTTGTGAACAAAATTAAGGTAAAATGTGATGATCGTGTTGCTGCACTTTTCCAAGAGCATCCAGATCTTCTTGATGAGTTTACTCATTTTCTCCCGGACACTTCCTCAGCAGCCTCTACTCATTATATTTCTGCTAGAAATTTTATGCTACGTGATAGGAGCTCTGCAATGCCAACTGTACGGCAAATGCATGTTGAGAAGGTTTATCTCAATATTTTTCTGTCCCCGAGATGCTAA 630 0.4492 MFKYGKNFNSRNTHQMKTFLKYAGPPHGRRPRNGEARQLTLGGRELELTWAAFPFCAWQEQNDPLHPRRTRLGPYQDLRQRNRAISLRQTQNGDLLLGFNTFLPRGYEITLPLDDEQPAPKKPVEFEEAINFVNKIKVKCDDRVAALFQEHPDLLDEFTHFLPDTSSAASTHYISARNFMLRDRSSAMPTVRQMHVEKVYLNIFLSPRC* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1448 209 Pfam Paired amphipathic helix repeat 143 162 IPR003822 GO:0006355
Amo14g1448 209 PANTHER SIN3B-RELATED 93 189 IPR039774 GO:0003714
Amo14g1448 209 PANTHER SIN3A, ISOFORM G 93 189 - -
Amo14g1448 209 Gene3D Paired amphipathic helix 139 166 IPR036600 GO:0006355
Amo14g1448 209 SUPERFAMILY PAH2 domain 120 164 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1448 Amo-Chr14 24624186 24625030 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo14g1448 PAH 7.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1448 K11644 - aip:110271441 392.504